Macaca thibetana thibetana (Pere David's macaque): 126931200
Help
Entry
126931200 CDS
T08579
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126931200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126931200
Enzymes [BR:
mthb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126931200
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126931200
mRNA degradation factors
3'-5' decay
Pan complex
126931200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_CDC20-Fz
WD40_like
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
126931200
NCBI-ProteinID:
XP_050605071
LinkDB
All DBs
Position
11:complement(52622202..52639955)
Genome browser
AA seq
1208 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLIGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKESDSEFDSFSQVTESPVGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPDDKTGKNYDFAQVLKRSICLDQNTQAWCDNCEK
YQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHGGEISKNKEFALA
DWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE
HGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH
EAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM
LNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF
IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL
QKDFRVINLMVWQGSFKSLLVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETH
DSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAA
VFSSVLAL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgagggtctggaccctggactggcagagtatgccccagccatgcattctgcc
ctggaccctgtcctggatgcccacctgaacccaagtctgctacagaatgtggagctggac
ccagagggagtggccttggaggctcttcccgtccaggaatcagtgcacataatggaaggt
gtctactctgaattgcacagcgtggtggctgaagtgggtgtacctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtggggagccacgggggccatgccacttcattt
tttggcccagccttggagcgctactcatcctttcaagtcaatggcagtgatgatattcgg
cagatccagagcctggagaatggtatcctttttctcaccaagaacaatctcaagtacatg
gcccgtgggggcctcattatatttgattacctgctagatgagaatgaggatatgcacagt
ctcctactgactgacagcagcactctactcattggtgggctgcagaatcacatactagag
attgatcttaacactgtccaggagactcagaagtatgcagtagagacgccgggagtcacc
atcatgagacagacaaatcgcttcttcttctgcggccacacgtctggcaaggtttccctg
agagatctccgtacttttaaggtggaacatgagtttgatgccttctcaggaagtctttca
gattttgatgtgcatggcaacctgctagctgcctgcggcttctccagccgcctcactggc
ctggcctgcgaccgtttcctcaaggtgtatgatttgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcattcctacatatacttctcgtctt
gctatcatctctcagtcagggcagtgccagttctgtgaacccacaggcctagccaaccca
gcagatatctttcatgtgaatcctgtggggcctctgctaatgacatttgacgtgtcagcc
agcaagcaggccctggcgtttggggattctgagggctgtgtgcacctctggactgattcc
ccggagccttccttcaacccctactcccgtgagactgagtttgctttgccgtgtctcgtg
gactcactgcctcctctggactggagccaggacctgctgcctctttccctcatccctgtc
ccactcaccactgacacacttctctctgattggcctgctgccaactctgctccagctccc
aggcgagcaccacctgtggatgcagagattctgcgcaccatgaagaaggtgggcttcatt
ggctatgcgcccaatcctcgcaccaagctgcgcaatcagataccttacagactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccagtaggacgagaagag
gagccacatctccacatggtttctaagaaataccgcaaggtgaccatcaaatattccaag
ctagggctggaggactttgacttcaaacactacaataagaccttgtttgctggattagag
ccccacatccccaacgcctactgtaactgcatgatccaggtgctctatttcctggagcct
gtacgctgtctaattcaaaaccacctttgccagaaggagttctgtctggcatgtgagctg
ggcttcctctttcacatgttggacctctctcgtggtgacccttgccagggcagtaatttt
cttcgggcattccgtactattcctgaggcctcagcccttggtctgatcctggctgactca
gatgaggcttcaggcaagggcaatctggccaggctcattcagaggtggaatcgcttcatt
ctcactcaactgcatcaagatatgcaggagctggaagtaccacaggcttatcgaggtgct
ggaggcagcagcttttgctcatcgggggactctgttattgggcagctcttcagctgtgag
atggagaactgcagcctctgccgctgtggcagcgagaccgtgcgagcctcatccaccctg
cttttcacactctcctaccctgatgataaaactgggaagaactatgactttgctcaggtg
ctgaagcgaagcatctgcctggaccagaatacacaggcctggtgtgacaactgtgaaaag
taccagcccacgattcagacccgcaacatccgccatctgccagatattcttgtcatcaat
tgtgaggtgaacagctcaaaagaggctgatttctggagaatgcaggctgaggttgccttc
aagatggcagtaaagaaacatggtggggaaatctccaagaacaaggagtttgctttggct
gattggaaggaactagggagtccagagggtgtgctggtatgtccctccattgaggagctg
aagaatgtctggcttcctttctccattcgcatgaagatgaccaagaacaaagggctggat
gtttgcaattggactgatggggatgagatgcagtggggcccagccagggcagaggaggag
catggtgtctatgtgtatgacctgatggctactgtggtacacatcctggactcacgcaca
gggggcagcctggtggctcacatcaaagttggagagacctaccaccagcgcaaggagggt
gttactcaccagcagtggtatctgttcaatgactttcttattgaacctattgataagcat
gaagctgtgcagtttgacatgaattggaaagtacctgcaatcctttattatgtcaaacgg
aatctcaattccagatacaacttgaacatcaagaaccctattgaggcaagtgtcttgctg
gctgaagcctcgctggcacggaagcagcggaaaacacatactacctttattccactgatg
ctgaatgagatgccacagattggggacctggtgggtctggatgctgagtttgtcaccctt
aatgaggaggaagcagagttacgcagtgatggtaccaagtctaccattaaaccaagtcag
atgtcagtagccaggattacctgtgtccggggccagggacctaatgagggtatccccttc
attgatgactacatctctacccaggagcaggtggtggattacttgactcaatactcgggt
ataaagcctggtgacctcgatgccaaaatttcctccaagcacctaacaactctcaagtct
acctacttaaagcttcgttttctcattgacattggagtcaagtttgtgggtcatggcctg
cagaaggacttccgggtcatcaacctgatggtttggcagggctcttttaagagtcttctt
gtgcccaaggaccaagtccttgatactgtctacctgttccacatgccccgaaaacgaatg
atttccctgcgattccttgcttggtactttctggacctgaagattcaaggggaaacccat
gacagtattgaggatgcacgcacagcccttcagctctaccgaaagtatctggagctaagc
aaaaatggcactgagcctgagtctttccacaaggtgctcaagggtctttatgagaagggc
cgaaagatggactggaaggtgcctgagcctgagggccaaacaagtcccaagaatgcagct
gtcttctcctcagtgctggcgctctga
DBGET
integrated database retrieval system
