Macaca thibetana thibetana (Pere David's macaque): 126932884
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Entry
126932884 CDS
T08579
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04151
PI3K-Akt signaling pathway
mthb04510
Focal adhesion
mthb04512
ECM-receptor interaction
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05165
Human papillomavirus infection
mthb05200
Pathways in cancer
mthb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126932884
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126932884
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126932884
09142 Cell motility
04820 Cytoskeleton in muscle cells
126932884
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
126932884
09154 Digestive system
04974 Protein digestion and absorption
126932884
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126932884
09162 Cancer: specific types
05222 Small cell lung cancer
126932884
09172 Infectious disease: viral
05165 Human papillomavirus infection
126932884
09174 Infectious disease: parasitic
05146 Amoebiasis
126932884
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126932884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthb04147
]
126932884
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126932884
Exosome [BR:
mthb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126932884
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126932884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
126932884
NCBI-ProteinID:
XP_050608102
LinkDB
All DBs
Position
12:15458821..15615628
Genome browser
AA seq
1378 aa
AA seq
DB search
MSSLHVVLMRCSFRLTKSLATGPWSLILILFSVQYVYGSGKKYVGPCGGRDCSVCHCVPE
KGSQGPPGPPGPQGPIGPLGAPGPTGLSGEKGMRGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGFPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AIKGIQGDRGDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGLKGNPGVGVKG
QMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGELGLVGDPGPFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEAYAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGL
PGKPGASGPPGNKGAKGDVVISRVKGHKGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIAGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGRPGVRGPDGLKG
QKGDTVSCNVTYPGRQGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGMSGFPGDQGVRGAKGAIGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEK
GQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPAPA
SHFGPPGPKGEPGSSGCPGHFGASGEQGLPGVQGPRGSPGWPGPPGSSGPPGCPGDRGMP
GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVG
PPGPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRVPKDIPDPG
PSGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGLPGPPGPPGYKGFPGCD
GKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGELPTCQSVLFKHLLK
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctgcacgtagtactaatgaggtgctccttcagattgaccaagtcattggcc
acaggtccctggtcacttatactcattctcttttctgtacaatacgtatatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccactgtgttcctgaa
aaggggtctcagggtccaccaggaccaccggggccacagggtccaattggacccctggga
gccccaggacccactgggctttcaggagagaaaggaatgagaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggcccaactggtgttcctggatttccaggttta
gatggcatacctgggcacccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccattaaaggtattcagggagacagaggcgacccaggactgcccggcttaccaggatct
tggggtgcaggaggaccagcgggccccacaggatatcctggagagccagggttagtggga
cctccgggccaaccagggcgtccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcaaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggtataaaaggaattcctggaatg
attggactgccaggaccaccaggacgcaagggagaatctggtattggggcaaaaggagaa
aaaggcattcctggatttccagggccttggggggatcctggttcctacggatctccaggt
ttcccaggattaaagggagaactaggactggttggagatcctgggccatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccctggccgctatggagaa
acaggggatgttggaccacctggtcccccaggtctcttgggcagaccaggggaagcctat
gcaggcatgataggaccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccctggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcctccggaccacccggcaacaaaggggcgaagggtgacgtggtc
atatcaagagttaaagggcacaaaggagaaagaggtcctgatgggcccccaggatttcca
gggcaaccaggatcgcatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagacgcgattgcaggtggtaaaggatttcctggacctctgggtccc
ccaggcaaagcaggacctgtggggcccccgggactgggatttcctggtccaccaggagag
cgaggccacccaggagttccaggccgcccaggtgtgaggggccctgatggcttgaagggt
cagaaaggtgacacagtttcttgcaatgtgacctatcctgggaggcaaggccctccaggt
tttgatggacctccaggtccaaagggatttccaggtccccagggtgcccctgggctgagc
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtcca
cctggttttcgtggtgacataggagatccgggttttggaggtgaaaaggggtcctcccct
gttgggcccccaggccctcctgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaagaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggtgctgaagggccagctggcattcct
ggattcccaggtctcaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaaccggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccgggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
cacggtcccccgggcctcccaggaatcccaggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggaccccgggggctgcctggtttcccaggttttcccggagaacga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacccggagagaagggcatg
tctggctttcccggagaccagggagtgagaggggccaaaggagccataggacctcctgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacccggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaacacccgggatgcaagggaga
agaggagagccaggaagatatggaccacctggatttcacagaggggaacctggtgagaaa
ggtcagccagggcctcctggacccccaggccctccaggctcaactggtctaagagggttc
attggttttccaggacttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaagaggacctaaaggaaacaaaggtgaccctgcccctgcc
agtcactttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcat
tttggagcatccggagagcagggcttgcctggcgttcaagggcccagaggatcacctgga
tggccaggaccacctggctcctctggaccaccagggtgcccaggtgatcgggggatgcct
gggctgaggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggat
ccagggataccaggtcctccaggaataaaaggtccctccgggtcacctggcctgaatggc
ttgcatggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtgggg
ccacctggtccagtgggaatgcctgggctaaaaggggagagaggagatcctgggagccca
ggaatctctcctccaggtccttgtggagaaaaaggtctcccaggtcccccagggagatca
ggaccacctggtcctgcaggtgccacaggaagagtgcctaaggacattcctgacccgggt
ccatctggagatcagggacctcctggtcccgatggcccaagaggagcacctgggcctcca
ggcctccctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccaggg
ccaccaggtctccccggcccaccaggccctccaggatacaaaggctttccaggatgtgat
ggaaaagatggccagaaaggaccaatgggattcccaggaccgcagggaccacatggattt
cctgggccacctggagagaagggtttacctggacctccagggagaaaaggacccactggt
cttccaggtgagcttcccacctgccagagcgttttgtttaaacatttactaaaatga
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integrated database retrieval system
