Macaca thibetana thibetana (Pere David's macaque): 126932960
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Entry
126932960 CDS
T08579
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04151
PI3K-Akt signaling pathway
mthb04510
Focal adhesion
mthb04512
ECM-receptor interaction
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05165
Human papillomavirus infection
mthb05200
Pathways in cancer
mthb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126932960
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126932960
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126932960
09142 Cell motility
04820 Cytoskeleton in muscle cells
126932960
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
126932960
09154 Digestive system
04974 Protein digestion and absorption
126932960
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126932960
09162 Cancer: specific types
05222 Small cell lung cancer
126932960
09172 Infectious disease: viral
05165 Human papillomavirus infection
126932960
09174 Infectious disease: parasitic
05146 Amoebiasis
126932960
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126932960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthb04147
]
126932960
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126932960
Exosome [BR:
mthb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126932960
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126932960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126932960
NCBI-ProteinID:
XP_050608262
LinkDB
All DBs
Position
12:complement(15310107..15458719)
Genome browser
AA seq
1670 aa
AA seq
DB search
MSPRTAPRSQVLLLQLLLVLLAAAPTASKGCVCKDKGQCFCDGAKGEKGERGFPGPPGSP
GQKGFTGPEGLLGPQGPKGSPGLPGLRGPKGVRGITGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCNGSKGERGFPGLPGTLGYRGILGAAGLKGQKGAPAEGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGQKGERGVKGLTGPPGP
PGTVTVTLTGPDNRTDLKGEKGDKGAIGQPGPPGPSGLPGESYRSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGLAGEDGIKGQKGDTGPPGFRGPTEYYDTYQEKGDEGIPG
PPGPKGVRGPQGPSGPPGVSGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSP
GCPGSPGPPGSPGPPGPPGDIVFRKGPPGDRGLPGYLGSPGITGVDGPKGEPGLLCTQCP
YIPGSPGLPGLPGLHGVKGIPGRPGAAGLKGSPGSPGNTGLPGIPGFPGAKGDRGLKGEK
GETLQPEGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSPGPAGPAGPPGYGPQGEPGPQGTQGVPGAPGPRGEAGPRGELSVSTPVPGPPGP
PGPPGHPGPQGPPGMPGSMGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSL
GCPGNLGEPGLPGKPGVPGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPGLPGLPG
TPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKMGPKGD
PGIPGLDRSGFPGETGSPGMSGHQGETGPPGQKGYPGNPGILGLPGEDGVVGMMGFPGAT
GPPGPPGNPGMPGQRGSLGIPGVKGQRGTPGAKGEQGDKGNPGPSQISHVIGHKGEPGLK
GFAGNPGEKGNRGVPGIPGLKGLKGLPGPAGPPGPRGDLGSTGNAGEPGLRGIPGSMGNM
GMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSEGTRPGPPGPTGDPGLPGEMG
KKGEMGQPGPPGHSGPAGPEGAPGSPGSPGLPGKPGPHGDLGFKGIRGFPGPPGIKGPPG
LPGFPGSPGPMGVRGDQGRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGSPGFP
GLPGRKGAMGDAGPRGPTGIEGLPGPPGLPGAIIPGRKGNHGPPGLRGSPGEPGPPGPPG
SHVTGIKGDKGSMGHPGPKGPPGTVGDMGPPGHLGAPGTPGLPGLRGDPGFQGFPGVKGE
KGNPGFLGSIGPPGPIGPIGPPGIRGDPGTLKIISLPGSPGPPGTPGEPGMQGEPGPPGP
PGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKGEPGPPGSDGLPGLKGKRGDSGSPAT
WTTRGFVFTRHSQTTAIPSCPEGTAPLYSGFSFLFVQGNERAHGQDLGTLGSCLQRFTTM
PFLFCNVNDVCNFASRNDYSYWLSTPALMPMNMAPITGRALEPYISRCTVCEAPAIAIAV
HSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGTGQALASPGSCLEEFRASPFLECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKRH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccggacggcgcccagatcgcaggtgctcctgctgcagctcctgctggtgctc
ctggcggcggcgcccacggccagcaagggttgtgtctgtaaagacaaaggccagtgcttc
tgtgatggagccaaaggggagaagggggagagaggctttcctggaccccctggttctcct
ggccagaaaggattcacaggtcctgaaggcttgcttggaccacagggccccaagggctct
ccaggacttccaggactcagaggtcccaaaggtgtaaggggaataactggattgccagga
ttttccggttctcctggacttccaggcaccccaggcaatactgggccttatggactcgtc
ggtgtaccaggatgcaatggttctaagggtgagcgggggtttccaggactcccagggaca
ttgggctaccgagggatcctgggtgctgctggtttgaaaggacaaaagggtgctcctgct
gaaggagaagatatagaacttgatgcaaaaggtgaccccgggttgccaggggctccagga
ccccagggtttgccaggccctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacaaaaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttactgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagccatcggccagcctggacctcctggaccctcaggactgcctgga
gaatcatatagatctgaaaagggtgctcctggagaccccggcccgcagggaaaacccggt
aaagacggcgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggttagcaggtgaagatggcattaagggacagaaaggggacaccggccctccaggattt
cgtggtccaacagaatattatgacacataccaggaaaagggagacgaaggcattccaggc
ccaccagggcccaaaggagttcgtggcccacaaggtcccagtggtccccccggagtttct
ggaagtcctggatcatcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggccgcccaggaaaggatgccatggggactcctgggtcccca
ggttgtcccggttcaccaggccctccaggatcgccgggacctccaggaccaccaggtgac
atcgtttttcgcaagggtccacctggagatcgcggactgccaggctatctagggtctcca
ggaatcacaggcgttgacgggcccaaaggagaaccaggcctgctgtgtacacagtgccct
tatatcccagggtcccctggtctcccagggttgccagggttacatggtgtaaaaggaatc
ccaggaagaccaggtgcagctggcttgaaaggaagcccaggatcccccggaaatacaggt
cttccaggaattccaggtttcccaggtgccaagggtgaccgaggacttaaaggagaaaaa
ggtgaaacacttcagcctgaggggcaagtgggtgccccaggggacccggggctcagaggc
caacctgggagaaagggcttggatggaattcctggaactccaggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaagggggaccaaggtcctccaggggat
cctggctcccctgggtccccaggacctgcaggaccagctggaccacctggctacggaccc
caaggagaacctggtccccagggcacgcaaggagttcctggagcccctggaccacgcgga
gaagccggtcctaggggagaactcagtgtttcaacaccagttccaggcccaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggtatgcctggatctatgggg
aaatgtggagatcctggtcttccaggacctgatggtgaaccaggaattccaggaattgga
tttcctgggcctcctggacctaagggagaccaaggttttccaggtacaaaaggatcactg
ggttgtcctggaaatttgggagagcctgggttacctggaaagccaggcgtcccaggagcc
aagggagaaccagcagtagccatgcctggaggaccaggaacaccaggttttccaggagaa
agaggcaattctggggaacatggagaaattggactccctggacttccgggtctccctgga
actccaggaaatgaaggtcttgatggaccacgaggagatccagggcagcctggaccacct
ggagaacaaggacccccaggaaggtgcatagagggtcctaggggagcccaaggacttcca
ggcttaaatggattgaaagggcaacaaggcagaagaggtaaaatggggccaaagggagac
ccaggaattccaggcttggatagatcaggatttcctggagaaactggatcaccaggaatg
tcaggtcatcaaggcgagacgggaccaccgggtcaaaaaggatatccaggaaatccagga
attttagggctaccgggtgaagatggagtggttgggatgatgggctttcctggagccact
ggccctccgggaccccctgggaacccaggcatgccagggcagagggggagccttggaatt
ccaggagtaaagggccagagaggaaccccaggagccaaaggggaacaaggagataaagga
aaccccgggccttctcagatatcccacgtgatagggcacaaaggagaaccaggtctcaaa
ggattcgcaggaaatccaggtgagaaaggaaacagaggcgttccagggataccaggttta
aaaggcctcaaaggactacctggaccagcaggaccaccaggccccagaggagatttgggc
agcactgggaatgctggagaaccaggactacgtggtataccaggaagcatggggaacatg
ggcatgccaggttctaaaggaaaaaggggaactttgggattcccaggtcgagcaggaaga
ccaggcctcccaggtattcacggtctccagggagataagggagagccgggttattcagaa
ggtacaaggccaggaccaccaggaccaacgggggatccaggactgccgggtgaaatggga
aagaaaggagaaatggggcaacctggcccacctggacattcggggcctgctggacctgag
ggagcccctggaagtcctggaagtcctggcctcccaggaaagccaggtcctcatggtgac
ttgggttttaaaggaatcagaggcttcccgggccctccaggaatcaaaggccctccaggt
cttccaggattcccaggatctcctggaccaatgggtgtaagaggtgaccaaggacgtgat
ggaattcctggtccagccggagaaaagggagaaacgggtttattgcgggcccctccaggc
ccaagaggaaacccgggtgctcaaggagctaaaggagacaggggatccccaggttttcct
ggcctccctggcagaaaaggggccatgggagatgctgggcctcgagggcccacaggcata
gaaggactcccagggccaccaggtctgcccggtgcaattatccctggccggaaaggaaat
catggtccaccaggcttaagaggaagcccaggtgagcctggtccccctggacctccaggg
agtcacgtaacaggcataaaaggagacaaagggtctatgggccaccctgggccaaaaggt
ccacctggaactgtaggagacatgggaccaccaggtcatctgggagcaccaggtactcca
ggtcttccaggactcagaggtgatcctggattccaggggtttccaggcgtgaaaggagaa
aagggtaatcctggatttctaggatccattggacctccaggaccaattgggccaatagga
ccacctggtatacgtggagaccctggcacacttaagattatctcccttccaggaagccca
gggccacctggcacacctggagaaccagggatgcagggagaacctgggccaccagggcca
cctggaaacctaggaccctgtgggccaagaggtaagccaggcaaggatggaaaaccagga
actcctggaccagctggagaaaaaggcaataaaggttctaaaggagagccaggaccacct
ggatcagatggattgccaggtttgaaaggaaaacgtggagacagtggatcacctgcaacc
tggacaacaagaggctttgtcttcacccgacacagtcaaaccacagcaatcccttcatgt
ccagaggggaccgcgccactctacagtgggttttcttttctctttgtacaagggaatgaa
cgagcccacggacaagacctcggaactctgggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatgtcaatgatgtatgtaatttcgcatctcgaaatgattattca
tactggctgtcaacaccagctctgatgccaatgaacatggctcccattactggcagggcc
cttgagccttatataagcagatgcactgtttgtgaagctcctgcgatcgccatagctgtt
cacagccaaaccactgacattcctccatgtcctcacggctggatttctctctggaaagga
ttttcgttcatcatgttcacaagtgcaggttctgagggcaccgggcaagcactggcctcc
cccggctcctgcctggaagaattccgagccagcccatttctagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggctggcttcattaaacccagaaaga
atgttcagaaagcctattccatcaactgtgaaagctggagaattagaaaaaataataagt
cgctgtcaggtgtgcatgaagaaaagacactaa
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