Macaca thibetana thibetana (Pere David's macaque): 126933167
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Entry
126933167 CDS
T08579
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04611
Platelet activation
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126933167
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
126933167
09152 Endocrine system
04926 Relaxin signaling pathway
126933167
09154 Digestive system
04974 Protein digestion and absorption
126933167
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
126933167
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
126933167
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126933167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126933167
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126933167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
126933167
NCBI-ProteinID:
XP_050608747
LinkDB
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Position
12:complement(53887622..53926046)
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AA seq
1466 aa
AA seq
DB search
MMSFVQKGSWLLLALLHPTIILAQQEAVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN
GDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLGGYPGPAGPPG
PPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPAGPPGPPGAMGPSGPAGKDGESGRPGRPG
ERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SNGAPGQRGEPGLQGQAGAQGPPGPPGSSGSPGGKGEMGPAGIPGAPGLMGARGPPGPPG
ANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPG
AAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPG
SPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPG
PKGDAGSPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAG
TPGLQGMPGERGGPGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKG
EGGAPGLPGIAGPRGGPGERGEPGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPG
VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGNNGNPGPPGPGGSPG
KDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGPQGPPGAPGPLGIAGITGARGLAG
PPGMPGPRGNPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGAAGEPGRDGNPGSDG
LPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAG
SRGAPGPQGPRGDKGETGERGANGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRG
PVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGV
GAAAIAGVGGEKAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGTRKNPAR
NCRDLKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCISASPLNVPRKHWWTDSG
AEKKHIWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD
QASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLP
IVDIAPYDIGGPDQEFGVDVGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggagctggctacttcttgctctgcttcatcccactatt
attttggcacaacaggaagctgttgaaggaggatgttcccatcttggtcagtcctatgcg
gatagagatgtctggaagccagaaccatgccaaatttgtgtctgtgactcaggatccgtt
ctctgtgatgacataatatgtgacgatcaagaattagactgccccaacccagaaattcca
tttggagaatgttgtgcagtttgcccgcagcctccaactgctcctactcgccctcctaat
ggtcaaggacctcaaggccccaagggagatccaggccctcctggtattcctgggagaaat
ggtgaccctggtattccaggacaaccaggttcccctggttctcctggcccccctggaatc
tgtgaatcatgccccactggtcctcagaactattctccccagtatgattcatatgatgtc
aagtctggagtagcagtaggaggactcggtggctatcctggaccagctggccccccaggc
cctcccggtccccctggtacatctggtcatcctggttcccctggatctccaggataccaa
ggaccccctggtgaacctggacaagctggtcctgcaggccctccaggacctcctggtgct
atgggtccatctggtcctgctggaaaagatggagaatcaggtagacccggacgacctgga
gagcgaggattgcctggacctccaggtatcaaaggtccagctgggatacctggattccct
ggtatgaaaggacacagaggcttcgatggacgaaatggagaaaagggcgaaacaggtgct
cctggattaaagggtgaaaatggtcttccaggtgaaaatggagctcctggacccatgggt
ccaagaggggctcctggtgagagaggacggccaggacttcctggagccgcgggtgctcgg
ggtaatgacggtgctcgaggcagtgatggtcaaccaggccctcctggtcctcctggaact
gccggattccctggatcccctggtgctaagggtgaagttggacctgcagggtctcctggt
tcaaatggtgcccctggacaaagaggagaacctggacttcagggacaagctggtgctcaa
ggtcctcctggccctcctgggagtagtggtagtcctggtggtaaaggcgaaatgggtccc
gctggcattcctggagctcctggactgatgggagcccggggtcctccaggaccacccggt
gctaatggtgctcctggactgcgaggtggtgcaggtgaacctggtaagaatggtgccaaa
ggagagccaggaccacgtggtgaacgcggtgaggccggtattccaggtgttccaggagct
aaaggcgaagatggcaaggatggatcacctggagaacctggcgcaaatgggcttccagga
gctgcaggagaaaggggtgcccctgggttccgaggacctgctggaccaaatggcatccca
ggagaaaagggtcctgctggagagcgtggtgctccaggccctgcagggcccagaggagcg
gctggagaacctggcagagatggtgtccctggaggtccaggaatgaggggcatgcccgga
agtccaggaggaccaggaagtgatgggaaaccagggcctcccggaagtcaaggagaaagc
ggtcgaccaggtcctcctgggccatctggtccccgaggtcagcccggtgtcatgggtttc
cccggtcctaaaggaaatgatggtgctcctggtaagaatggagaacgaggtggccctgga
ggacctggccctcagggtcctcctggaaagaatggtgaaactggacctcagggaccccca
gggcctactgggcctggtggtgacaaaggagacacaggaccccctggtccacagggatta
caaggcttgcctggtacaggtggtcctccaggagaaaatggaaaacctggggaaccaggt
ccaaagggtgatgccggttcacctggagctccaggaggcaagggtgatgctggtgcccct
ggtgaacgtggacctcctggattggcaggggccccaggacttagaggtggagctggtccc
cctggtcccgaaggaggaaagggcgctgctggtcctcctgggccacctggtgctgctggt
actcctggtctgcaaggaatgcctggagaaagaggaggtcctggaagtcctggtccaaag
ggtgacaagggtgaaccaggcggtccaggtgctgatggtgtcccagggaaagatggtcca
aggggtcctactggtcctattggtcctcctggcccagctggccagcctggagataagggt
gaaggtggtgcccctggacttccaggtatagctggacctcgtggtggccctggtgagaga
ggtgaacctggccctccaggacctgctggcttccctggtgctcctggacagaatggtgag
cctggtggtaaaggagaaagaggggctccaggtgagaaaggtgaaggaggccctcctgga
gttgcaggaccccctggaggttctggacctgctggtcctcctggtcctcaaggtgtcaaa
ggtgaacgtggcagtcctggtggacccggtgctgctggcttccctggtgctcgtggtctt
cctggtcctcctggtaataatggtaacccaggacccccaggtcccggcggttctccaggc
aaggatgggcccccaggtcctgcgggtaacacaggtgctcctggcagccctggagtgtct
ggaccaaaaggtgatgctggtcaaccaggagagaagggatcacctggtccccagggtccc
ccaggagctccaggcccacttggaattgctgggattactggagcacggggtcttgcagga
ccaccaggcatgccaggtcctaggggaaaccctggccctcagggtgtcaagggtgaaagt
gggaaaccaggagctaacggtctcagtggagaacgtggtccccctggaccccagggtctt
cctggtctggctggtgcagctggtgaacctggaagagatggaaaccctggatcagatggt
cttccaggccgagatggatctcctggtggcaagggtgatcgtggtgaaaacggctctcct
ggtgcccctggtgctcctggtcatccaggcccacctggtcctgtcggtccagctggaaag
agtggtgacagaggagaaagtggccctgccggccctgctggtgctcctggtcctgctggc
tcccgaggtgctcctggtcctcaaggcccacgtggtgacaaaggtgaaacaggtgaacgt
ggagctaatggcattaaaggacatcgaggattccctggtaatccaggtgccccaggttct
ccaggccctgctggtcagcagggtgcaattggtagtccaggtcctgcaggccccagagga
cctgttggacccagtggacctcctggcaaagatggaaccagtggacatccaggtcccatt
ggaccaccagggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggccac
ccagggcaaccaggtcctcctggacctcctggtgcccctggtccttgctgcggtggtgtt
ggagccgctgccattgctggggttggaggtgaaaaagctggcggttttgccccatattat
ggagatgaaccaatggatttcaaaatcaacaccgatgagattatgacttcactcaagtct
gttaacggacaaatagaaagcctcattagtcctgatggtactcgtaaaaaccctgccaga
aactgcagagacctgaaattctgccatcctgaactcaagagtggagaatactgggttgac
cctaaccaaggatgcaaattggatgccatcaaggtattctgtaatatggaaactggggaa
acatgcataagtgccagtcctttgaatgttccacggaaacactggtggacagattctggt
gctgagaagaaacacatttggtttggagagtccatggatggtggttttcagtttagctat
ggcaatcctgaacttcctgaagatgtccttgacgtgcagctggccttccttcgacttctc
tccagccgagcttcccagaacatcacgtatcactgcaaaaatagcattgcgtacatggat
caagccagtggaaatgtaaagaaggccctgaagctgatggggtcaaatgaaggtgaattc
aaggctgaaggaaatagcaaattcacctacacagttctggaggatggttgcacgaaacac
actggggaatggagcaaaacagtctttgaatatcgaacacgcaaggctgtgagactacct
attgtagatattgcaccctatgacattggtggtcctgatcaagaatttggtgtggacgtt
ggccctgtttgctttttataa
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