Macaca thibetana thibetana (Pere David's macaque): 126933777
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Entry
126933777 CDS
T08579
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126933777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthb03021
]
126933777
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126933777
Transcription machinery [BR:
mthb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126933777
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126933777
U7-dependent histone pre-mRNA processing factors
126933777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
126933777
NCBI-ProteinID:
XP_050609860
LinkDB
All DBs
Position
13:complement(97623250..97674999)
Genome browser
AA seq
721 aa
AA seq
DB search
MEVVLLVDGVLLSFFTFQFRKTPATCSPPPLRPHTFGMSAIPAEESDQLLIRPLGAGQEV
GRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWF
LQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEV
KEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILII
ESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPEL
HDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPS
VVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLP
LKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHI
EVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNY
TDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEIQEKPALKVFKNITVIQEPGMV
VLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQKVSKKLEMHVYSKRLEIMLQDIFG
EDCISVKDDSILSVTVDGKTANLNLETRTVECEEGSEEDESLREMVELAAQRLYEALTPV
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgtgctcttggtggatggggttcttctttctttctttaccttccaatttagg
aagaccccggcgacctgttccccgcccccgcttcgccctcacactttcgggatgtctgcg
attcctgctgaggagagcgaccagctgctgatccgacctcttggagctgggcaagaagta
ggaagatcatgtattattctcgagttcaaaggaagaaaaataatgctggactgtgggatc
caccctggcctagaaggaatggatgctcttccttatattgatttaattgatccagctgag
attgatctcctattaattagtcatttccatttggatcactgtggagctctgccctggttt
ctacagaagacaagtttcaaaggaagaacatttatgactcatgccacaaaagctatttat
agatggcttctttccgattatgtcaaagttagtaacatatcagcggacgacatgttgtat
accgagacggatttggaagaaagcatggacaaaattgaaactatcaactttcatgaagtt
aaggaagttgcaggaatcaagttttggtgttaccatgcagggcacgtcctaggagccgcc
atgttcatgattgagatcgcaggcgtgaagcttttgtacacaggtgatttctcaagacaa
gaagatagacacttaatggcagctgaaattcctaacattaagcctgatattcttatcatt
gaatctacttatgggacccacatccatgagaaacgtgaagagcgagaggcaagattctgt
aacactgtccacgacattgtaaacagaggaggcaggggtctcattcctgtcttcgctctt
ggaagggctcaggagctgctcttgattctggatgagtactggcagaatcacccagaacta
catgacattccaatatactatgcatcatctttggccaagaagtgtatggcagtgtaccag
acatacgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaataatcccttt
gttttcaaacacattagtaacctcaagagcatggatcattttgatgacattggtcccagt
gttgtcatggcctccccaggcatgatgcaaagtggcttatccagagagttatttgaaagc
tggtgtactgataagaggaacggtgtcattatagcaggatactgtgtggaagggacactt
gccaagcacatcatgtctgaacctgaagaaatcactactatgtctggacagaagttacca
ctgaaaatgtctgttgattacatttctttctcagctcacacggattaccagcaaaccagt
gaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaacagaatgaa
atggccagattgaaagcagcactgattcgagaatatgaagataatgatgaagttcacata
gaggttcataatcctcggaatacagaagcagtgaccttaaacttcagaggagaaaaacta
gccaaggttatgggatttttagcagacaaaaaaccagaacaaggccagcgggtgtcagga
atacttgttaaaagaaactttaattatcacatactttctccttgcgacctgtccaattat
actgacttggcaatgagcactgtaaagcagacccaggccattccatatactggtcccttt
aatttgctctattaccagttgcagaagttgacaggtgatgtggaagaattagaaattcaa
gaaaaacctgctctgaaagtgttcaaaaatattactgtaatacaagaaccaggcatggtg
gtattagaatggctggcaaacccttctaatgatatgtatgcggatacagtaacaactgtg
atattggaagttcagtcaaatcccaaaataagaaaaggtgcagtacagaaggtttctaaa
aaattagaaatgcacgtttatagcaagaggttggagatcatgcttcaggacatatttgga
gaagactgtataagtgtaaaggacgactctattcttagtgtcacagtggacgggaaaact
gccaaccttaacttggagacacggactgtagaatgtgaagagggaagcgaagaggatgaa
tccctccgagaaatggtggagctggctgcacagaggctgtacgaggccctgacgccggtt
cactga
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