Macaca thibetana thibetana (Pere David's macaque): 126934891
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Entry
126934891 CDS
T08579
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126934891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthb03021
]
126934891
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126934891
Transcription machinery [BR:
mthb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126934891
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126934891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
126934891
NCBI-ProteinID:
XP_050611725
LinkDB
All DBs
Position
14:74937514..74966708
Genome browser
AA seq
1685 aa
AA seq
DB search
MSEQTPAEAGAAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPSMAVKAPHQVPVQSEKSRPGPSLQIQDVKGTNRDPRLN
RMSQHSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELEQL
DSKSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVK
EKRKTAEKKDKDEHMKSSEHRLAGSRNKIINGIVQKQDTITDESEKQGTKPGRSSTRKRS
RSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPPSRE
DRNAKRSTKQDIRDPRRMKKTEEERPQETTNQHSTKSGTEPKENVENWQSSKSAKRWKSG
WEENKSLQQVDEHSKPPHLRHRESWSSTKGILSPRAPKQQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDDFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVARDGPTKMI
FEGPNKLSPRIDGPPTPASLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRGQPVGGLRFEGGHGPSGAAIRFDGPHGQPGGGIRFEGPLLQ
QGVGMRFEGPHGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTPGQ
PGPQRFDGPPGQQVQPRFDGVPQRFDGPQHQQTSRFDIPLGLQGTRFDNHPSQRLESVSF
NQTGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLNRASGHY
FDEKNLQSSQFGNFGNIPAPMTVGNIQASQQVLSGVAQPVAFGQGQQFLPVHPQNPGFVQ
NPSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTLSEVAAQPPPEEEEDQN
EDQDVPDLTNFTVEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPAENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPSEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtgctgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcgctcgaagacctgaccttcaatagcaagccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatt
gtgaaaaacgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactaggaaaagtttatttaagttacgttcc
acatgggatgaaatattccctttgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacgtctagcatccat
gtgaatcctaaatttttaaataaatcgcccgaggagccttcaacacctggtacagtggtc
agttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacacaa
gaacaactaataaggcagcagttactggcaaagcaaaaacagttgttagaacttcagcag
aaaaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggaaacatccaatttaggtcctggatctgcaccatctaaattacatgtttcacag
attccctctatggcagttaaagctcctcatcaggttcctgtgcaatctgagaaaagccgt
ccaggaccatccttacaaattcaggatgtgaaaggaactaaccgggatcctcgtctgaac
aggatgagccaacattctcatggaaaagatcaaagtcacaggaaagaatttctaatgaac
acattaaaccagtctgatattaagacaagtaaaactataccctctgaaaaactaaattca
tccaagcaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaacaatta
gattctaaatcgaaatcaaaatcaaaatcaccatcacctttgaaaaacaaattgtctcac
acaaaagacttgaaaaatcaagaatcagaaagtatgaggttgtctgatatgaacaagaga
gacccaagattaaaaaaacatcttcaggataagactgatggcaaagacgatgatgtgaaa
gagaagagaaaaactgcagaaaaaaaggataaagatgagcacatgaagtcatctgaacac
agactggctggaagtagaaataaaatcataaatggcattgtacaaaaacaggatacaata
acagatgagtcagaaaaacaggggacaaaaccagggagatcgagtactagaaagcgatca
agatctcgatcacccaagtctaggtcaccaattatacattccccaaagagaagagatagg
cggtcacccaagcgaaggcaaagaagtatgtctccaacgtcgacacctaaagctggaaag
attcgccaatctggagttaagcagtcacatatggaagagtttacaccaccttctagggaa
gacagaaatgctaagagaagtactaaacaggatattcgggatccaaggcgaatgaaaaag
actgaagaggagcggccacaagaaactacaaatcagcattctacaaagtcaggcactgaa
ccaaaggagaatgtagaaaactggcaaagttccaagtctgccaaaagatggaaatctggt
tgggaagaaaataaaagcttacagcaggttgatgaacatagtaaacctcctcatctgagg
catagggagagctggtcaagcactaaaggaattttatcgcctcgagccccaaagcagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gacttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagagatctccattcaatgat
cgttttccacttaagcgacctcgatatgaagattcagataaaccatttgtagatagccca
gcatcaagattcgccggcctggatacaaatcagcgacttacagctttagctgaagacaga
ccattatttgatggacctagtaggccatcagtagcaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctcgaattgatggacctcccacaccagcttctctt
cggtttgatgggtcaccaggacaaatggggggaggaggccctttgagatttgaaggacca
caaggtcagctaggaggtgggtgtcctttgagatttgaaggtcctccaggaccagtgggg
acacctctgcggtttgagggcccaattggtcaagcaggaggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggtttacgatttgagggaccaggg
ggccagcctgtgggtggtctgaggtttgagggacatcgtggtcaacccgtgggtggtcta
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgaggt
cagcctgtaggtggacttagatttgaggggggtcatggtccatcaggggctgctattagg
tttgatggacctcatggtcagccaggaggtggaatcagatttgagggccctttgctacag
caaggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtctgagattt
gagggacaacataaccaacttggtggaaaccttaggtttgagggtccacatggccaacca
ggggttggtatcaggtttgaaggccctttagtccaacaaggaggtggaatgaggtttgag
ggtccttctgtaccaggaggtggcctgagaattgaagggcctctgggtcaaggtggtcca
agatttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccgtcactcttg
ccaagatttgatggattacatggtcagccaggtcctagatttgaaaggactcctggtcag
ccagggcctcagaggtttgatggaccacctggacagcaggttcagcccagatttgatggt
gtacctcaaagatttgatggtccacaacatcagcagacatcaaggtttgatattcctctt
ggtcttcaaggcacaagatttgacaatcatccttcacaaaggcttgaatcagtatctttc
aatcagactggtccatataatgatccacctggcaatgcttttaatgccccatctcaagga
ctacagttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatgga
ccacatggccctggaaaccagagtttctctaatccacttaacagagcttctggacactat
tttgatgaaaaaaatcttcagagttctcaatttggaaactttggcaatatacctgctcca
atgacagtaggaaatattcaggcatctcaacaggttctgagtggtgttgctcagccagta
gcttttggtcaaggacaacagtttttaccagttcatccacaaaatcctggatttgttcag
aatccttcaggagcactccctaaggcgtatcctgataatcatctcagtcaagtggatgta
aatgaattgttttcaaaattgctaaaaacaggaattctcaaattgtcccaacctgattca
gctacaacactaagtgaagtagctgctcagcctccccctgaagaggaggaagatcaaaat
gaagatcaagatgttccagatcttactaattttacagttgaagaattgaaacaacgttat
gacagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtttatgcggatcatttggactggcattatcggcaaaataga
actgaaaaggatgttagcagaaaagtcactcatagacgttggtactacagtttaacagac
tggatagaatttgaggagatagctgatctggaagaacgggcaaagagccagttttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaagaggctgctaaagaaaaagagttccaa
agtgtacctgctggaccagctggagcagttgagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaggaggaggaatggcatttgaaaaatgctattagagtagat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagctgaaaaccccttgaatattatgttgaacattgtc
aaaaacgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacgaattgataca
ccaccagcttgtacagaggaaagcatagcaacaccctctgaaattaaaacagaaaatgac
acagttgagtcagtttaa
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integrated database retrieval system
