Macaca thibetana thibetana (Pere David's macaque): 126936084
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Entry
126936084 CDS
T08579
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126936084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126936084
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126936084
mRNA degradation factors
5'-3' decay
Decapping complex
126936084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
126936084
NCBI-ProteinID:
XP_050614449
LinkDB
All DBs
Position
14:14050311..14083143
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AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFTQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPVFRPDTTHLHPQ
HRRLLYQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLCLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTITSLLQQLM
NLPQSAATPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDQQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggactgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagcta
ccagtggcagttaatgaacaaacaggcaatggagagagagatgaaatggacttgttaggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagttttacaaccccaaccaggaagc
ctgaattccagtatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccccag
ggtccagaagatgatcgggacctttctgaacgtgcattaccaaggcggtcaacttcacct
atcattggcagtcctcctgttagagctgtccccataggcaccccacctaaacagatggct
gtacccagcttcacccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccacctcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacgaatgtctcccagc
cagtttgcacgggtgcctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccctccgctacaccacctccacagcagcaccctcctggcccaggaccccacctg
caaaacctaagatctcaggccccagtgtttagaccggacacaactcaccttcatccacag
caccgtcgactcttgtatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcaggagatagaggaagtcaccggagcagtcatcaagatcatctccgaaaggatcca
tatgccaatctcatgttgcagcgggaaaaggattgggtctccaaaatccagatgatgcaa
ctgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaaatacaaggtgatggccctaagaaggaacgcaccaag
cttatcacccctcaggtggccaaactggagcacgcctataagccagtgcaatttgagggc
tctttgggaaagcttactgtttctagtgtgaataatccccgaaaaatgattgatgctgtt
gtgacatctcggagtgaggatgatgagacaaaagaaaaacaagttcgagacaagaggaga
aaaacccttgtcataattgagaaaacctacagcttactccttgatgtggaggactatgaa
agacgttatctcctatgtctagaagaagagcgacctgccctaatggatgagagaaagcac
aaaatttgtagcatgtatgacaacttgagggggaaattgcctggacaagagaggcctagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctc
cctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctcctcctctatcatcttccatcagtgactatcaccagccttttgcaacagctaatg
aacctacctcaaagtgcagctacaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctccttatcctcctgagccgtggtgaagacctacag
agttcagaccctgctacagaatcaacgcaaaataatcagtggacggaggtgatgttcatg
gcaacacgagaacttctacgaattccccaagcagccctggccaagccaatctctatacct
acaaacctagtgtccctcttttctcgctatgttgaccagcagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacgataa
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