Macaca thibetana thibetana (Pere David's macaque): 126936879
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Entry
126936879 CDS
T08579
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03013
Nucleocytoplasmic transport
mthb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126936879
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126936879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126936879
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126936879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
TRS130_4HB
Gar1
Motif
Other DBs
NCBI-GeneID:
126936879
NCBI-ProteinID:
XP_050615664
LinkDB
All DBs
Position
15:complement(9508715..9574696)
Genome browser
AA seq
1763 aa
AA seq
DB search
MASGGGVRARARSKMAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEG
LSYYKSPSPSSAEKVKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRD
SVKTVLQDERQSQALILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLE
KELVSKYRQQFEELYKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFE
MAPSDLLVLTKMFKEQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCA
LDDRRELHQFAQDGLICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIG
GTAIQLNVFQYLTRLLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDT
ACEVLADPSLPELFWGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYS
FLDKMSFYNELYKHKPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDR
AYLVRWEYSYSSWTLFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCL
LPITSRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLHHTGFLPFVAHPV
SSLSQMISAEGMNAGGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPC
VMFVLKEMLPSYHKWRYNSHGVREQIGCLILELIHAILNLCHETDLQNSHTPSLQSLCIC
SLAYTEAGQTVINIMGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIR
LKPPSNVVSPLEQALSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSV
YACLGNDAAAIRDAFLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSD
GSKEFSLGMWSCLHAVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTK
PKFWENLTSPLFGTLSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKF
SIEKRFAYWSGYVKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDS
VVRHQLFLDVLDGTKALLLVPASVNCLRLGSMQCTLLLILLRQWKRELGSVDEILGPLTE
ILEGVLQADQQLMEKTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALF
DQTRHSLALGGATEDKDSMETDDCSRSRHRDQRDGVCVLGLHLAKELCEVDEDGDSWLQV
TRRLPILPTLLTTLEVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLPL
LSVYQLSTNGTAQTPSASRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVH
QERTLQCLNAVRTVQSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLCQ
ACTSLLHSRKMLQHYLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQRA
LHTVQYGLLKILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPS
FGTLLATVNVALNMLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQA
MRYLRDPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSLS
KASPESQEPLIQLVQAFVRHVQR
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgggggcggggttagggcgcgcgcgcgctcgaagatggcggcggccgccggc
gggccgtgtgtgagaagcagtagagaactgtggactattctgcttggaaggtcagctctg
agagagctgagtcagattgaggcagaactgaataaacattggcggcgattgttagagggg
ctttcttactacaaatctcccagcccaagttcagctgaaaaagtgaaagctaataaagat
gttgcgtcaccattgaaggaactgggtttaagaatcagcaagtttttgggtcttgatgaa
gaacagagtgtgcagttactccagtgttacctgcaagaggactacaggggtactcgggac
tcagtaaagacagtactgcaagatgagaggcagagccaggccttaatcctgaagattgca
gattattattatgaagaaagaacctgtattcttcgttgtgtcttacaccttctcacttac
ttccaagatgaaagacacccctatagggttgaatatgcagactgtgttgataaattggag
aaggaactagtttcaaaatacagacagcagtttgaagagctttataaaactgaagcacca
acttgggagacacatggaaatctcatgacagagcgccaagtgtctcgctggtttgttcag
tgtcttcgggaacagtccatgctgctagaaattattttcctttattatgcatactttgag
atggcacccagtgacctacttgtattaaccaagatgtttaaagagcaaggatttggtagt
aggcagaccaataggcacctggtggatgagactatggatccttttgtagatcggattggc
tacttcagtgccctcatcctggtggagggcatggatattgagtccttacataagtgtgct
ttggatgacagaagagaactgcaccagtttgcgcaggatgggcttatttgtcaggatatg
gaccgtttaatgttgacctttggggacattccacatcatgccccagttcttttggcctgg
gctctcctccgtcacactctgaacccagaagagacaagtagtgtggtccggaagataggt
ggcacagccatccagctgaatgtgtttcagtacttgacccgattgctccagtcacttgcc
agtgggggaaatgattgcaccaccagcactgcatgcatgtgtgtctatggactgctatct
ttcgttctgacctcgttggagctgcacacactgggcaatcagcaggatataattgataca
gcatgtgaagtcctggccgacccttctcttccggaactgttctggggaacagagccaact
tcgggccttgggatcattctggacagtgtgtgtggcatgtttccccacctcctctcccca
ctcctgcaactgctccgagccctggtatcagggaagtccactgccaaaaaggtatatagc
ttcttggataagatgtctttctacaatgaactttataaacacaagcctcatgatgtaatc
tcccatgaagatggaactctttggcggagacaaacacccaaactcctttatccccttgga
ggtcaaactaaccttcgcatacctcaaggcactgtgggccaagtaatgttggatgatagg
gcatacctggtacgctgggaatactcctatagcagctggaccctctttacctgcgagatt
gaaatgttgcttcatgttgtttcaactgcagatgtgattcagcactgccagcgagtcaaa
cccatcattgatcttgtccataaggtcatcagtacagacctgtcgatagcagactgcctc
ctgcccatcacatctcgcatctacatgctgctgcagcggttaacgacagtgatctcccca
cctgtggatgtcattgcttcttgtgtcaactgcttaactgttttggctgcccgcaatcca
gcaaaggtctggactgatcttcatcacacaggctttttaccatttgtggcccatcctgtc
tccagcctgagtcagatgattagtgcggaagggatgaacgctggagggtacggaaacctc
ttgatgaatagtgagcagcctcagggcgagtatggggtcactgttgcctttctgcgcttg
atcaccaccctcgtcaaggggcaacttggtagtacccagagccaaggacttgtgccctgt
gtaatgtttgtgctgaaggagatgcttcccagctaccataagtggcgctacaactctcat
ggagtgagggaacagattggttgcctgatcctggagctgattcatgcgatactgaacctg
tgccacgagacagacctgcaaaacagtcatactcccagcctgcagtctctctgcatctgc
agccttgcatacacagaggcaggacagacagttatcaatatcatgggcattggcgtggac
accattgacatggtgatggctgctcagcctcgaagtgatggggcagagggccaggggcag
ggccagctgctgatcaagacagtgaaactggcattctccgtcaccaacaatgttattcgg
ctgaaacctccttctaatgtggtgtctcccctggaacaggctctctcacaacatggtgct
catggaaacaacctcattgctgttctagccaaatacatctaccacaaacatgaccctgct
ttgccacgtcttgccattcagctgctgaaacgtctggccacggtggccccaatgtcagtg
tatgcttgtctgggcaatgatgcggctgccattcgtgatgccttcctgacccgattgcag
agcaaaattgaggacatgcgcatcaaagttatgattctagagttcctcacagttgcagta
gagacccagccaggcctcatcgaactgtttctgaacctggaggttaaggatggcagtgat
ggctcaaaggaattcagccttgggatgtggagctgtctccatgcagtgctggagctgatt
gattcccaacagcaagatcgatactggtgcccacccctgctgcatcgtgccgccattgcc
tttttgcatgctctgtggcaggaccggagggacagtgccatgctggtcctccgaaccaaa
cccaagttttgggaaaatttaaccagtccactgtttggaaccctttctcctccctctgaa
acatcagagcccagcatcctggaaacctgtgccctcatcatgaagataatttgcttggag
atatactatgtagttaagggttcattagaccagtcattaaaagatacactcaagaaattt
tccatcgagaaacgctttgcctactggtcagggtatgtcaagtcattggcagttcacgtg
gccgaaacagaaggcagcagctgcacctccttgttagagtaccagatgctggtgtccgcc
tggaggatgcttctcatcattgccaccactcatgcagatataatgcacctgactgactct
gtggtgcgtcaccagctctttcttgacgtgcttgatggaaccaaagcattactcctagtt
ccagcctcagtgaactgccttcgcctcggctccatgcagtgcactctgctgcttatcctc
ctccggcagtggaagagagagttaggttccgtggatgaaatccttggacccttgacggag
atcctggaaggagtgctgcaggccgaccagcaactcatggagaagaccaaggccaaggtg
ttctcagcattcatcacagtgttgcaaatgaaggagatgagagtaagtgacatcccccag
tactcccagctggtgctgaacgtctgtgagaccctccaagaggaagtgattgcactcttc
gaccagacccgccacagtctggcattaggcggtgccaccgaggacaaggacagcatggag
actgacgactgttctcggtcccggcacagggaccagcgtgatggggtgtgtgtcctgggc
ctgcacctggccaaggagctgtgtgaggtagatgaggatggtgactcctggctgcaggtg
acccgcaggctccccatcctacctaccctcctcaccaccttagaggtgagccttcgcatg
aagcagaacctacatttcactgaggccacactgcatctgcttctcaccctggctcgcact
cagcagggagccacagcagtggctggagctggcatcacccagagcatttgtttgcccctt
ctgagtgtgtaccagctgagcaccaatggcacagcacagacgcctagcgcctctcggaag
tccctggatgccccctcttggccaggagtctaccgcctgtccatgtccttgatggagcgg
ctgctgaaaactctgcgctacaacttcctgactgaggccctggacttcgtaggtgtccac
caggagcggaccttacagtgcctcaacgcggtgaggacagtgcagagtctggcctgcctg
gaggaggcggaccacaccgtgggttttattctgcagctctccaacttcatgaaggagtgg
cacttccacttgcctcagctcatgcgtgatatccaggtcaacctgggttacctgtgccag
gcatgcacctccctcctgcacagtcgaaagatgctgcagcattacttacagaacaaaaat
ggggatggcctcccctcggccgttgcccagcgagtccagaggccaccgtctgctgcttct
gctgccccctcctcctccaagcagcccgctgctgacacagaggcatcagagcagcgggcc
ttgcacacagtccagtatggccttctcaagatcctcagcaggacgctggcagccctgcgc
cacttcaccccagatgtctgccagatcctgctggatcagtccctggaccttgctgaatac
aacttcctgtttgccctgagctttaccactcccacctttgactccgaagtggccccctcc
tttgggacccttctggctacagtgaatgtggccctcaacatgcttggagagctggacaag
aaaaaggagcccctcacccaggcagtggggctcagcacacaggcagaagggaccaggacg
ttaaagtccctcctgatgtttaccatggaaaactgcttctacctgctcatctctcaggcg
atgcggtaccttagggacccagctgtgcatccccgggacaaacagcggatgaagcaggag
ctcagctctgagttgagcacgctgctctccagcctctcgcgctacttccgccggggagcc
cccagctcccctgccactggtgtcctcccctcgccgcagggcaagtccacctctctctcc
aaagccagccctgagagtcaagagcctctgatccagctagtgcaggcatttgtccggcat
gtgcaaagatag
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integrated database retrieval system
