Macaca thibetana thibetana (Pere David's macaque): 126938334
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Entry
126938334 CDS
T08579
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126938334
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
126938334
3'-5' decay
Other 3'-5' decay factors
126938334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
Bac_DnaA
AAA_7
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
126938334
NCBI-ProteinID:
XP_050618341
LinkDB
All DBs
Position
16:72444940..72621227
Genome browser
AA seq
1943 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQYSMADFTGPCPLEIERIKIESL
LYRIASFLQLKNYVQADEDCRHVLGEGLAKGEDAFRAVLCCMQLKGKLQPISTILAKSLT
GESLNGMVTKDLTRLKTLLSETETATSNALSGYHVEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVSTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEISKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KQKLGQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKDQHEQNRNGKSDTNNSGPEITKIRTPEKKPTEPKQVDLESNPQNRSPE
SRPSVVYPSTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHPLPQLPRPPFPIPQQHTL
LNQQQNNLPEQANQMPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQAGPNNAFFNNAVAHR
PQSPPAEAVISEQQPPPMLQEGHSPLRAITQPGPILPSHLNSFIDENPPGLPIGEALDRI
HGSVALETLRQQQARFQQWSEHHAFLSQGSVPYPHHHHPHLQHLPQPPLGLHQPPVRADW
KLTSSAEDEVETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQYRQVQTRSPPAVP
SPPSSTDHSSHFSNFNDNSRDIEVASNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYLAP
DGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSS
SSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHSNQSSFNFS
SPESWVNTTSSTPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKSENLEVSSSFNYSV
LQHLGQFPPLMPNKQIAESANSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDP
LSLFQELSLGSSSGSNGFYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagcggaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgcacagaggcccttctttctctaggccagtactcc
atggcagacttcacagggccttgtcctttggaaatagaacgcatcaaaatcgagagtctt
ctctacagaattgcctcatttttgcaactgaaaaattatgtgcaagctgatgaagattgt
agacatgtgctgggagaaggactggccaagggagaggatgcctttcgggcagtgctttgc
tgcatgcagctgaaagggaagctccaacctatatccaccattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaggatttgacaagactaaaaacacttctttca
gaaacagagacagcaactagtaacgccctctctggatatcacgtggaagacttagatgag
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatatgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggctgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaacgttgata
gaaaagtggatgaattcattgtctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtagagcacaatcctgacctgtcagttactgtcagcactaaaaaatcccaccagaca
tggacctttgctctcacctgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatctcgaatacctgatgcatgcaaaacagcagctagta
accacagctaaacgttgggattcttcctctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcccctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagagcaactatcagtcacggtta
catgaccttctttatattgaggagatagcccagtataaagaaatcagcaagttcaacctt
aaagtgcaattgcagattctagcaagcttcatgctcactggcgtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaacagaagttaggacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaggaatatatatttttaaggctatctagggaatgctgtgaagaacttaat
cttcggcctgactgtgacacacaggttgaacttcagtttcagttaaatcgattacccctc
tgtgaaatgcactatgcactagacaggatcaaggacaatggggttttgtttccagacatc
agtatgactcccaccataccgtggagtcctaacagacaatgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaggctgttctggccattaccactccacttgcaatccag
ctgccgcctgtgcttatcatcggaccctatgggacaggcaaaacgttcactctagctcag
gctgtcaaacatattctgcagcaacaggagactagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagtgcacattccacctttcagatgccccagaaa
gaagatattcttaaacatcgagtggtggttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcattagcaactcaaaacactcggattgtcttg
gctggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcacgtttcattacttgaccgactctatgagcattaccctgctgagttcccatgtagg
attctcctgtgtgagaactaccgctcccatgaagctatcatcaattacacctctgagctt
ttctatgagggcaaactgatggccagtgggaagcagccagcacacaaagatttctaccca
ctaactttctttacagcacgaggagaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtgtttgaagtggtggaacgtgtggaagagttaagaaggaagtggcca
gtagcgtgggggaagttagatgatggcagtattggtgtggtgactccatatgctgatcaa
gtgtttagaatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaaga
catacttgtaaacataaacagacaccaattaaaaagaaagagcaacttctggaagattcc
acagaggacttagattatggttttttatctaactacaagcttctcaatactgccatcaca
agagcacaatccctggttgctgtggtgggtgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggaacggtttattgccctgtgtcatgaaaacaatagcctacatgga
atcactttcgaacagatcaaggcccagttagaggctttagagctaaagaagacatacgtg
ttgaatccgctggcacctgaatttatcccccgggctctaagactgcagcattcaggaagt
accaacaaacagcagcaatcaccacccaaggggaaaagtcttcatcatacccagaatgat
cacttccagaatgatggaattgttcagcccaatccttctgtactcattggcaatcctatt
agagcatatactcctccaccccctcttggacctcacccaaatttgggaaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttatgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtagg
tttgcagttgatcctcgaatcattacacatcaggcagcaatggcctataacatgaacctg
ttacagacacatggacgaggatctcctattccttatggccttggacatcacccacctgtc
agcataggccagccacaaaatcagcatcaggagaaggatcaacatgagcaaaatcgaaat
ggtaaaagtgatacaaataattccggacctgaaattactaagattcgaacaccagagaaa
aagccaacagaaccaaaacaggttgatttggaatcaaatccacagaacagaagtcctgaa
tcacgtcctagtgttgtttatcccagtaccaaatttcctcgcaaagataatctcaaccca
agacacataaatcttccccttcctgctccccacgcacagtatgcaatccctaatcgccat
tttcatccccttccccagctaccaaggccaccctttccaattccacagcagcacaccttg
ttaaatcagcagcagaataatttgcctgaacaagcaaatcagatgccacctcagccaaat
caggtagtccagcagcaaagtcagttgaatcagcagcctcagcagccacctcctcagctt
tctcctgcatatcaggcaggacccaacaatgctttttttaataatgcagttgctcatcgg
ccacagtctcctcctgcagaggctgtgatttcggagcagcagccccctcccatgctgcaa
gaaggccacagtcctctgagagccattacacaacctggccccattcttccttcgcatctg
aatagcttcattgatgagaaccccccaggattacctataggggaggctttagatcgtata
catgggagcgtcgctctggaaacattaagacagcagcaggcacggttccagcaatggagt
gaacatcatgcctttctcagtcagggcagcgttccatacccacaccatcaccatcctcac
ctccagcatcttcctcagccgcccctgggattacatcagccgccagtgcgggcagactgg
aagctcaccagcagtgccgaagatgaagtggagaccacatactcaaggtttcaagactta
atcagagaactgtctcatcgtgatcaaagtgaaacacgggaactagctgaaatgccacca
cctcaatcaagacttttgcaatatagacaagtacagactagaagcccaccagcagtccca
tctcccccatccagtacagaccacagtagccacttttctaactttaatgataacagcaga
gacattgaagtagccagcaacccagcatttccgcagcgcctcccaccccagatattcagc
tcacctttctcattgccatctgaacaccttgcccctcctcccttgaaatacctggcacct
gatggagcatggacttttgctaacttgcaacagaatcacctaatggggccaggttttccg
tatggcctacctccattgcctcacaggccaccgcagaacccttttgtacaaatacagaat
catcaacatgctattggtcaagagccatttcacccattgtcatctcgaacagtatcttct
tcttcgctccctagcttagaagagtatgagcccagaggacctggtcggcccttgtaccaa
agaagaatctcatctagctcagttcaaccttgttctgaagaagtaagcactcctcaagac
agtctggctcagtgtaaagagcttcaggaccacagtaatcaatcttctttcaacttttca
tccccggagtcctgggtaaacaccacctcatctactccttatcagaacattccgtgcaat
ggatccagcaggacagctcagcccagagagttgatagcgccacccaagactgtcaaaccc
cctgaggatcaactgaagtcggagaacctcgaggtgtccagttccttcaactacagtgtg
ctgcagcatctcggccagtttccaccccttatgcccaacaagcagatcgcggagtcagcc
aatagcagtagcccccagagctctgcagggggcaagcctgccatgtcctatgccagcgct
ctgcgggcccctccaaagcccaggccccctcctgagcaggccaagaagagtagcgaccct
ctgtctctcttccaggaactgagcctgggaagctcatctggcagcaatggcttttactca
tattttaaataa
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integrated database retrieval system
