Macaca thibetana thibetana (Pere David's macaque): 126939106
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Entry
126939106 CDS
T08579
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03013
Nucleocytoplasmic transport
mthb03015
mRNA surveillance pathway
mthb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126939106
09122 Translation
03013 Nucleocytoplasmic transport
126939106
03015 mRNA surveillance pathway
126939106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126939106
03041 Spliceosome [BR:
mthb03041
]
126939106
03009 Ribosome biogenesis [BR:
mthb03009
]
126939106
03012 Translation factors [BR:
mthb03012
]
126939106
Enzymes [BR:
mthb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126939106
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126939106
mRNA cycle factors
Stress granule specific factors
126939106
Spliceosome [BR:
mthb03041
]
Complex C
Other components
EJC/TREX
126939106
Ribosome biogenesis [BR:
mthb03009
]
Eukaryotic type
90S particles
Helicases
126939106
Translation factors [BR:
mthb03012
]
Eukaryotic type
Initiation factors
eIF-4
126939106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
126939106
NCBI-ProteinID:
XP_050619999
LinkDB
All DBs
Position
16:59291891..59613625
Genome browser
AA seq
411 aa
AA seq
DB search
MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggccacgatggcgacctcgggctcggcgcgaaagcgtctgctcaaagag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggatgtgacccccacgttc
gacaccatgggcctgcgggaggacctactgcggggcatctacgcttacggttttgaaaaa
ccatcagcaatccagcaacgagcaatcaagcagatcatcaaagggagagatgtcatcgcg
cagtctcagtccggcacaggcaaaacagccaccttcagtatctcagtcctccagtgtttg
gatattcaggttcgtgaaactcaagctttgatcttggctcccacgagagagttagctgtg
cagattcagaaggggctgctcgctctcggcgactacatgaatgtccagtgccatgcctgc
attggaggcaccaatgttggggaggacatcaggaagctggattatggacagcatgttgtc
gcgggcactccagggcgtgtttttgatatgattcgtcgcagaagcttaaggacacgtgct
atcaaaatgttggttttggatgaagctgatgaaatgttgaataaaggtttcaaagagcag
atctatgacgtgtacaggtacctgcctccagccacacaggtggtgctcatcagtgccacg
ctgccacacgagattctggagatgaccaacaagttcatgaccgacccaatccgcatcttg
gtgaaacgtgatgaattgactctggaaggcatcaagcaattttttgtggcagtggagagg
gaagagtggaaatttgacactctgtgtgacctctacgacacactgaccatcactcaggcg
gtcatcttctgcaacaccaaaagaaaggtggactggctgacagaaaaaatgagagaagcc
aacttcactgtgtcctcaatgcacggagacatgccccagaaagagcgggagtccatcatg
aaggagttccggtcgggcgccagccgagtgcttatttctacagacgtctgggccaggggg
ttggatgtccctcaggtgtccctcatcatcaactatgatctccccaataacagagaattg
tacatacacagaatcgggagatcaggtcgatacggccggaagggggtcgccattaacttt
gtgaagaacgatgacatccgcatcctcagagatatcgagcagtactattccactcagatc
gatgagatgcctatgaacgttgctgatctgatctga
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