Macaca thibetana thibetana (Pere David's macaque): 126939941
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Entry
126939941 CDS
T08579
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126939941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126939941
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
126939941
mRNA cycle factors
Common to processing body (P body) and stress granule
126939941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
126939941
NCBI-ProteinID:
XP_050621778
LinkDB
All DBs
Position
1:complement(179703758..179791590)
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AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTSATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RRLRQQRLIAIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSV
IESLAADGSPGLKSVLSTSRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARK
TPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQP
TAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYW
DSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSMFNEVYGKNLTSSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTPSGTWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccgaaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcacgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaatccgaatcgaagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatacccagttattacaagaactgtgtaca
gtatttaatgtagatttaccatgccgtgtgaagtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctccaatggtcagccttataatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctccactaatctgcaaaaagcactttct
aaagcactggaaagccgagatgaggtgaaaaccaagtggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagaaaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaactgagcagcacagttatagccaagatgagcagctatgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctacagaatgagtct
caggaggagtcctacaatgcctatcctcttccagcagtcaaggtctccatggactggcta
agactcagacccagggtctttcaggaggcagtggtggatgaaagacagtacatttggccc
tggttgatttctcttctgaatagtttccatccccatgaagaggacctctcaagtactagt
gcgacaccacttccagaggagtttgaattacaaggattcttggcattgagaccttctttc
aggaacttggatttttccaaaggtcaccagggtattacaggagacaaagaaggccagcaa
cgacgattacgacagcagcgcttgattgctataggcaaatggattgctgataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagaa
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagaaacatctgta
atagagtcgctggctgcagatgggagcccagggctaaaatcagtgctatctacaagccga
aatttaagcaacaactgtgacacaggagagaagccagtggttaccttcaaagaaaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaataactgtaactaagaatgatggaaagaaggacaacaacaagagg
aaaactgaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatcccagacagaactaagaaagactccagtgtccgaagccagaaaa
acacctgtaactcaaaccccaactcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagcaggccagggtttccaccaccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaatcacagccaccttcccagcaaccccttacatctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaagctctaactcagcaacaacagtcccct
acaaaagctgtgccggctttggggaaaagcccgcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaattatgcctgtgaaacagccctactaccttcagacccaagaccccataaaactgttt
gagccgtcattgcaacctcctgtaatgcagcagcagcctctagaaaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgg
gattcttcctacagcatggctgataacagatctgtaatggcacagcaagcaaatatagac
cgcaggggcaaacggtcaccaggagtcttccgtccagagcaggatcctgtacccaggatg
ccatttgaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccggctctg
ctggggcctctcgcctctcttcctggacgaagcctttttaaatccttattggagaagccc
tcagagctcatgtcacattcatcctctttcctgtccctcaccggattctctctcaatcag
gaaagatacccaaataatagtatgttcaatgaggtatatgggaaaaacctgacatccagc
tccaaagcagaactcaatccctcaatggccccccaggaaacatctctgtattcccttttt
gaagggactccgtggtctccatcacttcctgccagttcagatcattcaacaccagccagc
cagtctcctcattcctctaacccaagcagcctgcccagttctcctccaacacacaaccat
aattctgttccattctccaattttggacccattgggactccagataacagggatagaagg
actgcagatcggtggaaaactgataagccagccatgggtgggtttggcattgattacctc
tcagcgacgtcatcctctgagagcagttggcatcaggccagcactccgagtggcacctgg
acaggccatggcccctccatggaggattcctctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcag
cagaagcagaaacagcaacggggacaaggcaccatgaaccctccacactga
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integrated database retrieval system
