Macaca thibetana thibetana (Pere David's macaque): 126940499
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Entry
126940499 CDS
T08579
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04517
IgSF CAM signaling
mthb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126940499
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
126940499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mthb04121
]
126940499
Ubiquitin system [BR:
mthb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126940499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
126940499
NCBI-ProteinID:
XP_050622376
LinkDB
All DBs
Position
17:55542880..55760610
Genome browser
AA seq
1822 aa
AA seq
DB search
MEGLEEAEANCSVAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKI
NRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLIT
LYWLGRKAQSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSGYGDIWCPERG
EFLAPPRHHKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDLEFTFKMQDYNKD
DMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNRRSWASPVYTEAD
GTFSSGHEKNPLISQQISRTECGFANPASSHGEAYGFESGSDSEDERRFPDIVLDDLANR
RFQVKKRPQNFISKITSPNSCPQILSPADMFAMGLYGLTSNQRRIWGTNVENWPTVQGTS
KSSCYLEEEKAKTRSIPNIVKDDLYVRKLTPVMPNPGNAFDQFLPKCWTPEDVNWKRIKR
ETYKPWYKEFQGFSRRNSDSEDEDSGSARSATVFSRAQKAERRLDGSCQRPSLLLELATK
RAVKSPDSHAARRSSSASDEPSQFLLLQALQTYSDDILSSETHTKIDPTSGPRLITRRKN
LSYAPGYRRDDLEMAALDPDLENDDFFVRKTGAFHANPYVLRAFEDFRKFSEQDDSVERD
IILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYHPVPFPEPWTLPPEIQAKF
LCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQSWKLGTAVPPVSFTPGPCSEADL
QRWEAIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSAEDVQNLRQLRYEEMQKIKS
QLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSERSSKTFKEMLQDRE
SQNQKSTVPSRRRMYSFDDVLDEEKRPPTLTVSEASYRSERVEEKGTTYPSEILKEDSTT
FAKRENSVTTEIQLPSQSPVEEQRPTSLSSLRSLSTQMESTRVSASLPRSYQKTDTVRLT
SVVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNVVSTPAPNSDASQLASS
SFSQREVAATEEDATRQPSPTSPFSSLSQDQAATSKATLSSTSGLDLMSESGEGEISPQR
EVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDEII
AINNTKFSYKDSKEWEEAMAKAQETGHLVMDVRRYGKADWGKDQPSLPFIRHKTLNLTSM
ATKIIGSPETKWIDATSGIYNSEKSSNLSITTDFSESLQSSNIESKEINGIHDESNAFES
KASESISLKNLKRRSQFFEQGSSGFSYSSWVYLCGSSDSVVPDLPVPTISAPSRWVWDQE
EERKRQERWQKEQDRLLQEKYQREQEKLREEWQRAKQEAERENSKYLDEELMVLSSNSMS
VTTREPSPATWEATWSEGSKSSDREGTRAGEEDRRQPQEEVVHEDQGKKPQDQLVIERER
RREQELQEEQEQKRLQAETEEQKRPAEEQKHQAEIERETSVRIYQYRRPIDSYDIPKREE
ASSGFLPNDRNKSRSTTELDDYSTNKNGSNKYLDRIGNTTSSQRSSKKEQVPSGAELERQ
QILQEMRKRTPLHNDNSWIRQRSASVNKEPVSLPGIMRRGESLDNLDSPRSNSWRQPPWL
NQPTGFYASSSVQDFSRPPPQLVSTSNRPYMRNPSSSVPPPSAGPVKTSTTGVATAQSPT
PRSHSPSTSQSGSQLRNSVLPVSVTSEALPRELKSESETTSCTATTAISDSNLDGQPPCD
VNLHTKALLQIEEEVVAARVDL
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaagggctggaggaggcagaggccaactgctccgtcgcgttcgccgaggctcagaga
tgggtggaggcagtgacagagaagaattttgaaacaaaagattttcgagcctctctggaa
aatggtgttctgctgtgtgatttgattaataagcttaaacctggcgtcattaagaagatc
aatagactgtctacaccaatagcaggattggataatataaacgttttcttgaaagcttgt
gaacagattggattgaaagaagcccagcttttccatcctggagatctacaggatttatca
aatcgagtcactgtcaagcaagaagagactgataggagagtgaaaaatgttttgataaca
ttgtactggctgggaagaaaagcacaaagcaacccatactataatggtccccatcttaat
ttgaaagcatttgagaatcttttaggacaagccctgacgaaggcacttgaagactccagc
ttcctgaaaagaagtggcagggacagtggctacggtgacatctggtgtcctgaacgtgga
gaatttctggctcctccaaggcaccataagagagaagattcctttgaaagcttggactct
ttgggctcgaggtcattgacaagctgctcctctgatatcacgttgagaggggggcgtgaa
ggttttgaaagtgacacagatttggaatttacattcaagatgcaagattataataaagat
gatatgtcgtatcgaaggatttcggctgttgagccaaagactgcgttacccttcaatcgt
tttttacccaacaaaagtagacagccatcctatgtaccagcacctctgaggaagaaaaag
ccggacaaacatgaggataacagaagaagctgggcaagcccggtttatacagaagcagat
ggaacattttcgagtggacatgaaaagaatcctttaatttctcagcaaattagcagaaca
gagtgtggttttgcaaatccagcttcctctcacggggaggcgtacggttttgaaagtggt
tcggactctgaggatgaacgaaggtttcctgacatagttttggatgacttagccaaccgt
agattccaagtgaaaaagaggccccagaatttcatctcgaaaatcacctctcctaattct
tgtccgcaaatactttctcctgctgatatgttcgccatggggctgtatggactgacgagt
aatcagaggaggatttggggcaccaatgtggagaactggccaactgtacaaggaacttca
aagtcctcttgttatttggaagaggaaaaagcaaagacaagaagcatacccaacattgta
aaggatgatctttatgtgcgcaagctcactccagtcatgccaaacccagggaatgctttt
gatcagtttcttcccaaatgttggaccccggaagatgtgaactggaaaagaataaaaagg
gaaacttataagccatggtataaagaatttcagggattcagtagaaggaattcagattct
gaggatgaggactcaggttctgccagaagcgccaccgtttttagtagagcacaaaaagca
gagcgtaggctagacggcagctgccaaagaccttcactcttgctggaattagctaccaaa
cgggctgtaaaatcaccggactcccatgcagccaggagaagcagtagtgcttcggatgag
cccagtcagtttttactgcttcaggccctccaaacatactctgatgacatcttgtcttct
gaaacacataccaaaattgatcccacttctggcccaaggctcataacccgcaggaagaat
ctctcttatgcaccaggctatagaagagatgacctggagatggcggccctggatcctgac
ttagagaatgatgatttctttgtcagaaagactggggctttccatgcaaatccatatgtt
ctccgagcttttgaagactttagaaagttctctgagcaagatgattctgtagaacgagat
ataattttacagtgtagagaaggtgaacttgtacttccggatttggaaaaagatgatatg
attgttcgccgaattccagcacagaagaaagaagtaccgctgtccggggctccagataga
taccacccagtccctttccccgaaccctggactcttcctccagaaattcaagcaaaattt
ctctgtgtacttgaaaggacatgcccatccaaagaaaaaagtaatagctgtagaatatta
gttccttcatatcggcagaagaaagatgacatgctgacacgtaagattcagtcctggaaa
ctgggaaccgccgtgcctcccgtcagtttcacccctggcccctgcagtgaggccgacttg
cagagatgggaggccatccgggaggccagcagacttaggcacaagaaaaggctgatggtg
gagagactctttcaaaagatttatggtgagaatgggagtaagtccatgagcgatgtcagc
gcagaggatgttcaaaacttgcgtcagctgcgttacgaggagatgcagaaaataaaatca
caattaaaagaacaagatcagaaatggcaggatgaccttgcaaaatggaaagatcgtcga
aaaagttacacttcagatctgcagaagaaaaaagaagagagggaagaaattgaaaagcag
gcacttgagaagtctgagagaagctctaagacgtttaaggaaatgctgcaggacagggaa
tcccaaaatcaaaagtctacagttccttcgagaagaagaatgtattcttttgatgatgtg
ctggatgaagaaaaacgaccccctacactgactgtgtcagaagcaagttaccggagtgag
agagtagaagagaagggaacaacttatccttcagaaattctcaaagaagattctacaact
tttgcaaaaagagagaacagtgtaacaactgaaattcagcttccttctcaaagtcctgtg
gaagaacaacgcccaacctctttgtcttctctgcgttcactgagcacacaaatggagtcg
actcgtgtttcagcttctctccccagaagttaccagaaaactgatacagtcaggttaaca
tctgtggtcacaccaagaccttttggctctcagacaaggggaatctcatcactccccaga
tcttacacgatggatgatgcttggaagtataatggagatgttgaagacattaagagaact
ccaaacaatgtggtcagcacccctgcaccaaactcggatgcaagccaactggcttcaagc
tcatttagccagagagaggtagcagcaacagaagaagatgcgacaaggcagccctctcct
acatcccccttctcatctctttcccaagaccaggctgccacttctaaagccacactgtct
tccacatctggtcttgatttaatgtctgaatctggagaaggtgaaatctccccccaaaga
gaagtctcaagatcccaggatcagttcagtgatatgagaatcagcataaaccagacgcct
gggaagagtcttgactttgggtttacaataaaatgggatattcctgggatcttcgtagca
tcagttgaagcaggtagcccagcagaattttctcagctacaagtagatgatgaaattatt
gctattaacaacaccaagttttcatataaggattcaaaagagtgggaggaagccatggct
aaggctcaagaaactggacacctagtgatggatgtgaggcgctatggaaaggctgactgg
ggcaaagaccaaccttccctgccatttatacggcataaaaccctcaatctcaccagtatg
gctaccaaaattataggttcacctgagacaaagtggattgatgcaacttctggaatttac
aactcagaaaagtcttcaaatctatctataacaaccgatttctccgaaagccttcagagt
tctaatattgaatccaaagaaatcaatggaattcatgatgaaagcaatgcttttgaatca
aaagcatctgaatccatttctttgaaaaacttaaaaaggcgatcacaattttttgaacaa
gggtcatcaggcttttcttacagttcatgggtctacctctgtggaagctctgattcggtg
gttcctgatcttccagttccaaccatcagtgccccgagtcgctgggtgtgggatcaagag
gaggagcggaagcggcaggagaggtggcagaaggagcaggaccgcctactgcaggaaaaa
tatcaacgtgagcaggagaaactgagggaagagtggcaaagggccaaacaggaggcagag
agagagaattccaagtacttggatgaggaactgatggtcctaagctcaaacagcatgtct
gtgaccacacgggagccctctcctgccacctgggaagctacctggagtgaagggtccaag
tcttcagacagggaaggaacccgagcaggagaagaggacaggagacagccacaagaggaa
gttgttcatgaggaccaaggaaagaagccgcaggatcagcttgttattgagagagagagg
agacgggagcaagagcttcaggaagagcaagagcagaagcggcttcaggctgagactgag
gagcagaagcgccctgcggaggagcagaagcaccaggcagagatagagcgggaaacgtca
gtcagaatataccagtataggaggcctattgattcctatgatataccaaagagagaagaa
gcatcttcaggttttcttcctaatgacaggaataaatccagatctactactgaactggat
gattactccacaaataaaaatggaagcaataaatatttagaccgaattgggaacacgacc
tcttcacagaggagttccaagaaagagcaagtaccatcaggagcagagttggagaggcag
caaatccttcaggaaatgaggaagagaacaccccttcacaatgacaacagctggatccga
cagcgcagtgccagtgtcaacaaagagcctgttagtcttcctgggatcatgagaagaggc
gaatctttagataacctggactcccctcggtccaattcttggagacagcccccttggctc
aatcagcccacaggattctatgcctcttcctccgtgcaagactttagtcgcccaccacct
cagctggtgtccacatcaaaccgcccctacatgcggaacccctcctccagcgtgcccccg
ccttcagccggccctgtgaagacctccaccacaggtgtggccaccgcacagtcccccacc
ccgagaagccattccccttcaacttcacagtcaggctctcagctgcgcaacagtgtgttg
cctgtgagtgtgacctcggaggctcttcctcgggagctgaagtcagaatcagaaaccacc
agctgtactgcaacgactgctatctcagattcaaatctggacggccaaccgccatgtgat
gtaaacctccatacgaaagcactgttgcagatagaagaagaggtggttgctgctcgtgta
gatctataa
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