Macaca thibetana thibetana (Pere David's macaque): 126940593
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Entry
126940593 CDS
T08579
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04151
PI3K-Akt signaling pathway
mthb04382
Cornified envelope formation
mthb04510
Focal adhesion
mthb04512
ECM-receptor interaction
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05165
Human papillomavirus infection
mthb05200
Pathways in cancer
mthb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126940593
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126940593
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126940593
09142 Cell motility
04820 Cytoskeleton in muscle cells
126940593
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
126940593
09154 Digestive system
04974 Protein digestion and absorption
126940593
09158 Development and regeneration
04382 Cornified envelope formation
126940593
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126940593
09162 Cancer: specific types
05222 Small cell lung cancer
126940593
09172 Infectious disease: viral
05165 Human papillomavirus infection
126940593
09174 Infectious disease: parasitic
05146 Amoebiasis
126940593
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126940593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthb04147
]
126940593
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126940593
Exosome [BR:
mthb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126940593
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126940593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126940593
NCBI-ProteinID:
XP_050622542
LinkDB
All DBs
Position
17:89859612..90059973
Genome browser
AA seq
1712 aa
AA seq
DB search
MGRDQRAVAGPALRRWLLLGTVTVGFLAQGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPREERD
RYRGEPGEPGLVGFQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
EKGDVGQPGPNGIPSDTLHPIVAPTGVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGF
PGPRGPPGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDLGPPGLPAYSPHPSLAKG
ARGDPGFPGAQGEPGSQGEPGDPGPRGPPGLSIGDEDQRRGLPGEMGPKGFIGDPGIPAL
YPGPPGPDGKPGPPGPPGLPGPPGPDGFLFGRKGAKGTPGFPGLSGSPGARGPKGWKGDA
GDCRCAEGDEAVRGLPGLPGPKGFAGINGEPGRKGDKGDPGQHGLPGFPGLKGVPGNVGA
PGPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGSPGRNGLDGFPGLPGPPGDGIKGPP
GDAGYPGIPGTKGTPGEMGPPGLGLPGFKGQRGFPGDAGLPGPPGFPGPPGPAGTPGQID
CDTDVKRPIGGDRQEAVQPGCIGGPKGLPGLPGPPGPSGAKGLRGIPGFSGADGGPGPKG
LPGDPGREGFPGPPGFIGPRGSKGAVGLPGPDGPPGPIGLPGPDGPPGDRGLPGEVLGAQ
PGPRGDAGVPGQPGFKGLPGDRGPPGFRGSQGMPGMPGLKGQPGLPGPSGQPGLSGPPGQ
HGFPGAPGQEGPLGLPGIPGLEGLPGDRGDPGDIGAPGPVGMKGVSGDRGDAGLAGERGH
PGSPGFKGIDGMPGTPGLKGERGSPGMDGFQGMPGLKGRPGFPGSKGEAGFFGIPGLKGL
AGEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGIQGMPGIPGLS
GIPGLPGRPGHIKGVKGDIGAPGIPGLPGFPGVAGPPGITGFPGFIGSRGDKGAPGRAGL
YGEIGPTGDFGDIGDTINLPGRPGLKGEQGTAGIPGLKGFFGEKGTEGDIGFPGITGVTG
VQGPPGLKGQTGFPGLTGPPGSQGEPGRIGLPGGKGDDGWPGIPGLPGFPGLRGIRGLHG
LPGTKGFPGSPGADIHGDPGFPGPPGDRGDPGDANTLPGPVGVPGQKGEQGAPGERGPPG
SPGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDAGNPGAPG
TPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPAGAVGDRGPKGPKGDPGFPG
APGIVGAPGIAGIPQKIAIPPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQ
GRGGVSAVPGFRGDEGPVGHQGPIGQEGAPGRPGSPGLPGMPGRSVSIGYLLVKHSQTEQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
EQSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggggagagaccagcgcgcggtggccggccctgccctacggcggtggctgctgctgggg
acagtgaccgtggggttccttgcccagggcgtcttggcgggtgtgaagaagtttgatgtg
ccctgcggaggaagagattgcagcgggggctgccagtgctaccctgagaaaggtggacgt
ggtcagcctgggccagtgggcccccaggggtacaacgggccaccaggattacaaggattc
ccaggactgcagggacgcaaaggagacaagggtgaaaggggagcccccggaataacagga
cccaagggtgacgtgggagcaagaggcgtttctggattccctggtgccgatgggattcct
ggacacccggggcaaggtgggcccaggggaaggcccggctatgatggctgcaacggaacc
cagggagactcaggtccacaggggccccccggctctgaggggttcaccgggcctcccggg
ccccaaggaccaaaagggcagaaaggtgagccttatgcactgcctagagaggaacgcgac
agatatcggggcgaacctggggagcctggattggtcggtttccagggacctcccggccgc
cctgggcctgtggggcagatgggtccagttggagctccagggagaccaggaccacccgga
ccccctggaccaaaaggacagcaaggcaacagaggacttggtttctacggagttaagggt
gaaaagggtgacgtagggcagccgggacccaatgggattccatcggacaccctccacccc
atcgtcgcgcccacgggagtcaccttccacccagatcagtacaagggtgaaaaaggcagt
gagggggaaccaggaataagaggcatttccttgaagggagaagaaggaatcatgggcttt
cctggaccgaggggtccccctggcttgagtggtgaaaaaggatcaccaggacagaaggga
agccgaggcctggatggctaccaaggccctgatgggccccggggacccaagggagaagcc
ggagacctagggccccccggactacctgcctactcccctcacccttccctagcaaaaggt
gccagaggtgacccgggattcccaggggcccaaggggagccaggaagccagggggagcca
ggagacccgggcccccgaggaccccctggcctctccatcggagatgaagatcagaggaga
ggcctgccgggtgagatgggacccaagggcttcatcggagaccccggcatccctgcgctc
tacccgggcccacctggacctgatggaaagccagggcctccaggcccccccgggctccct
ggaccacctggacctgatggcttcctgtttgggcggaaaggagcaaaaggaacaccaggc
ttccctgggctttccggctcccctggagcccgtggaccgaagggatggaaaggtgacgct
ggggactgcagatgtgcagaaggcgacgaagctgtcagaggtcttccgggactgccagga
cccaagggcttcgcaggcatcaacggggagccggggaggaaaggggacaaaggagacccc
ggccaacacggcctccctgggttcccagggctcaagggagtccctggcaacgttggtgct
cctgggcccaaaggagcaaaaggagattccagaacaatcacgaccaaaggtgagcgggga
cagcccggcgtcccaggtgtgcccgggatgaaaggtgatgatggcagcccaggccgcaat
gggctcgatggattccccggcctcccaggccctcccggcgatggcatcaagggccctccc
ggggacgcgggctatccaggaattcctggaacgaaaggtactccgggagaaatgggtccc
ccaggactgggccttcccggcttcaaaggccaacgtggtttccctggagatgccggctta
cctggaccaccaggcttcccgggccctcctggccccgcagggaccccaggacaaatagat
tgtgacacagatgtgaaaaggcccattggaggtgacagacaggaggccgtccagccaggt
tgcataggagggcccaagggactgccaggcctgccaggacccccaggaccctcaggtgcc
aaaggcctccgaggaatcccaggcttctcaggagctgatggaggaccagggcccaagggt
ttgccaggagacccaggtcgtgaagggttcccaggacccccagggttcataggaccccga
ggatccaaaggtgcggtgggcctccctggcccagatggacccccaggtcccatcggcctg
ccagggccagacgggccccctggggacaggggccttcctggagaagtcctgggagcccag
cccgggccacggggagatgctggtgtgcctggacagcctgggtttaaaggccttcccgga
gacagaggcccccctggattcagaggaagtcaagggatgcctgggatgccagggctgaag
ggccagccgggcctcccgggaccttccggccagccaggcctgtccgggcctccaggacag
cacggatttccaggagctcctggccaagaggggcccttggggctgccaggaatcccaggt
cttgaaggtctgcctggagatagaggggaccctggggacataggcgctcctggccctgtg
ggcatgaaaggggtctctggtgacagaggagatgctggcttggcaggggagcgaggccat
ccaggaagccctggatttaaaggaattgatggaatgcctgggacccccgggctaaaagga
gagagaggctcacctgggatggatggtttccaaggcatgcctggactcaaagggagaccc
gggtttccagggagcaaaggcgaggctggatttttcggaatacccggtctgaagggtctg
gctggtgagccaggttttaaaggcagccgaggcgaccctgggcccccaggaccacctccc
atcatcctgccaggaatgaaagacattaaaggagagaaaggagacgaagggcctatggga
ctgaaaggatacctgggcgcaaaaggtatccaaggaatgccaggcatcccaggactgtca
ggaatccctgggctgcctgggaggcccggccacatcaaaggagtcaagggagacatcgga
gccccgggcatccctggtttgccaggattccctggggtggctggcccccctggaattaca
gggttcccaggattcataggaagccggggtgacaaaggcgccccggggagagcaggcctg
tatggcgagatcggcccgaccggtgatttcggtgacattggggacactataaatttacca
ggaagaccaggcctgaagggggagcagggcaccgctggaatcccaggtctgaagggattc
tttggagagaagggaacagaaggtgacatcggcttccctgggataacaggcgtgactgga
gtccaaggccctcctgggcttaaaggacaaacaggctttccagggctaactgggcctcca
gggtcgcagggagagccggggcggattggactgcctggtggcaaaggagatgatggctgg
ccgggaattccaggcttaccaggttttccgggactccgtgggatccgcggcttacacggc
ttgccaggcaccaaaggctttccaggatccccaggtgccgacatccacggagacccaggc
ttcccaggccctcctggggacagaggtgacccaggagacgccaacacccttccaggccct
gtgggagtcccaggacagaaaggagagcaaggagctccaggagaacgaggcccacctggg
agtccaggacttcaggggttccctggcatcacgcccccttccaacatctctggggcacct
ggtgacaaaggggcgccagggatatttggcctgaaaggttatcggggcccgccagggcca
cccgggtctgctgctcttcctggaagcaaaggtgacgcagggaacccaggagctccagga
accccagggaccaagggatgggccggggactccgggccccagggcaggccgggtgtgttc
ggtctcccgggagaaaaagggcccaggggtgaacaaggctttatggggaacactggaccc
gccggtgcggtgggcgacagaggccccaagggacccaagggagacccaggattccctggt
gcccccgggattgtgggagcgcccgggattgcaggaatcccccagaagattgccatccca
ccagggacagtgggtccgcaggggaggcgaggcccccctggagcaccaggggagatgggg
ccccagggcccccccggagaaccaggtttccgtggggctccagggaaagccgggccccaa
ggaagaggtggcgtgtctgctgttcccgggttccggggagatgaaggacccgtaggccac
caggggccgattggccaagaaggtgcaccaggccgtccagggagcccgggcctgccgggt
atgccaggccgcagcgtcagcatcggctacctcctggtgaagcacagccagacggaacag
gagcccatgtgcccggtgggcatgaacaagctctggagtgggtacagcctgctgtacttt
gagggccaggagaaggcacacaaccaggacctggggctggcgggctcctgcctggcgcgg
ttcagcaccatgcccttcctgtactgcaaccctggtgatgtctgctactatgccagccgg
aacgacaagtcctactggctgtctaccacggctccgctgcccatgatgcctgtggctgag
gatgagatcaagccctacatcagccgctgctcggtgtgtgaggccccagccgtcgccatc
gccgtccacagtcaggatgtctccattccacactgcccagctgggtggcggagcttgtgg
atcggatattccttcctcatgcacacggcggcgggagacgaaggcggcggccagtccctg
gtgtcaccgggcagctgtctggaggacttccgcgccacgccattcatcgagtgcaatgga
ggccgcggcacctgccactactacgccaataagtacagcttctggctgaccaccattccc
gagcagagcttccagggctcgccctccgctgacacactcaaggccggcctcatccgcaca
cacatcagccgctgccaggtgtgcatgaagaacctgtga
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