KEGG   Macaca thibetana thibetana (Pere David's macaque): 126940816
Entry
126940816         CDS       T08579                                 
Name
(RefSeq) roquin-1 isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
mthb  Macaca thibetana thibetana (Pere David's macaque)
Brite
KEGG Orthology (KO) [BR:mthb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mthb03000]
    126940816
   04121 Ubiquitin system [BR:mthb04121]
    126940816
Transcription factors [BR:mthb03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    126940816
Ubiquitin system [BR:mthb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    126940816
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 Prok-RING_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_2 FYVE zf_CCCH_4 zf-CCCH_4 Vesi_VP2 PaaA_PaaC Baculo_IE-1 zf-RING_4 zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 126940816
NCBI-ProteinID: XP_050622956
LinkDB
Position
1:189207521..189299519
AA seq 1134 aa
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDE
GAVDLPSRKPPALPNGIVSTGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPIPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPIYPSHYDSRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYP
VAPHPTQIRPSYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHPEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANSLAGQSQPPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNEVPAEDLT
LTFSSDVPNGSALTQESISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattgctgcagctcgtgggtgctcaggtccctgag
cagcagcctattactttatgtagtggggttgaagacacaaagcattatgaggaagctaag
aaatgtgtagaagaattagcattgtacttaaaaccgctcagcagtgctagaggagtgggt
ctgaacagcactacccagagtgttctgagtcgcccaatgcagaggaaacttgtgactcta
gtccactgtcaactagtagaagaagaaggcaggattcgtgctatgagggcagctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcaactctct
tccaatctttgggcagcagtaagggctagaggatgccagttccttggaccagcaatgcag
gaggaagctttaaaactggttctgctggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcagctcctttatagagcctcctgtttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagccctgcgg
cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccaatggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctggaaaatggg
ctggttgctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacgtttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaagcgcctggttccgagaagacccttgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctatccttccagatgaa
ggtgcagtggatctccctagcagaaaacctcctgctctgccaaatggaattgtatcaaca
gggaatacagtaacacagcttattccacgagggacagaccccagctatgattctagtctg
aaaccaggaaaaatagatcatctgagcagtagtgctcctggatcccctcctgacctgcta
gaatctgttcctaagagtatttctgccttacctgtgaatccacatcctatacctccaagg
gggccaacagatctgcctccaatgcctgtcaccaaaccacttcagatggtacctcgaggt
tctcagttatatccagcacaacagacagatgtttattatcaggatccgcgaggagcggct
ccaccatttgaaccagcaccttatcagcagggtatgtattatactccaccaccacaatgt
gtgtcccgctttgtccgacctccaccatccgctcctgaacctgctcctccctacttggat
cattatccaccctacctccaagatcgtgttgtaaactctcagtatggcacacagccacag
cagtacccacctatatacccatctcactatgatagccgtcgagtgtaccctgctcagtct
tacacaagagaagagatattccgagaaagccctatacccattgagattccacctgcagca
gtaccatcgtatgtaccagaatccagagaaagataccaacagatcgagagttactatcca
gtggctcctcatccaactcagatcagaccttcgtacctcagagaacctccttatagccgg
cttcctcctcctccccagcctcatcctagtctagatgaactacatcgccgacgaaaggaa
ataatggcccagctggaggaaagaaaggttatctctccacctccttttgcaccttcacca
accttgcctcctacctttcatccagaagaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtactctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagggaccagcgattagatcttcagagaagagcagca
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtgtctcggtttggt
gccatctcgcgaacttccaaaactatatatcagggtgctggtccaatgcaggctatggca
cctcagggagctcctacaaaatctattaacatttcagattatagtccatatggaacccac
ggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatatctatgtcagaagtggccagtcatggaaaaccccttccatct
gctgagagagaacagctacgactagaattgcaacaattgaaccatcagattagccagcag
acccagctacgtggactagaggctgttagtaacagactggtgttgcagagggaggcaaac
agcctggcaggccagtcacagcccccaccaccgccacctccaaaatggcctggaatgatc
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggaaattgggaagagaaca
cgggaactgagtatggaaaaccagtgttctctggacatgaaaagcaaactgaatacaagt
aaacaagccgaaaatggacaaccagaaccacaaaatgaggttccggctgaagaccttaca
ttgacattcagcagtgatgtaccaaatggatcagccttgacacaagagagtatcagcctc
ctatctaacaagaccagctctctgaacctatcagaggaccctgagggaggaggggataac
aatgactcccagagatcaggagttactcccagttctgctccttaa

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