Macaca thibetana thibetana (Pere David's macaque): 126940929
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Entry
126940929 CDS
T08579
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04115
p53 signaling pathway
mthb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126940929
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
126940929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mthb04121
]
126940929
Enzymes [BR:
mthb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126940929
Ubiquitin system [BR:
mthb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126940929
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126940929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_TEP1_C
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
126940929
NCBI-ProteinID:
XP_050623072
LinkDB
All DBs
Position
1:187068067..187327724
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AA seq
771 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALVSGGAAQPAGSGG
LGGPVRPVLVAPAVSGSGGGAVSTGLSRHSCVARPSAGVGGSSSSLGSGSRKRPLLAPLC
NGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNI
DHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNL
MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS
GLYSPVSEDSTVPQFEAPSPSHSLEFSSDMHRIFVNGIFIISIIDSTEYSQPPGFSGSSQ
TKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRY
NSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHY
PENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN
LMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHY
YDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINE
KNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSA
VCWRALPDGESNVLIAANSQGTIKVSYLLYLHFKLRTIFRLKQDYGNIPLY
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagccgccaggccgggtcgggctccgctgggactagccccggctcttcggcg
gcctcctcagtgacttccgcctcctcgtctttatcctcttccccgtcgccgccttccgtg
gcggcttcggcggcagcgctggtgtccggcggggcggcccagcccgccggctcgggcggc
ctcgggggcccagtgcggcctgtgttggtggcacccgccgtgtcgggcagcggcggcggg
gcggtgtccactggcctgtcccggcacagctgcgtggccaggcccagcgccggcgtggga
ggcagcagctccagcctaggcagcggcagcaggaagcgacctcttctcgcccctctctgc
aacgggctcatcaactcctacgaggacaaaagcaacgacttcgtatgccccatctgcttt
gatatgattgaagaagcatacatgacaaaatgtggccacagcttttgctacaagtgtatt
catcagagtttggaggacaataatagatgtcccaagtgtaactatgttgtggacaatatt
gatcatctgtatcctaatttcttggtgaatgaactcattcttaaacaaaagcaaagattt
gaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacaggtggcag
atatttcaagatttgttgggaactgaccaagataaccttgatttggccaatgtcaatctt
atgttggagttactagtgcagaagaagaaacaactggaagcagaatcgcatgcagcccag
ctacagattcttatggaattcctcaaggttgcaagaagaaataagagagagcaactggaa
cagatccagaaggaactaagtgttttggaagaggatattaagagagtggaagaaatgagt
ggcttatactctcctgtcagtgaggatagcacagtgcctcaatttgaagctccttctcca
tcacacagcctagaattcagttctgatatgcacaggatctttgtcaatggaatatttatt
attagtattattgattccacagaatacagccaacctccaggtttcagtggcagttctcag
acaaagaaacagccttggtataacagcacattagcatcaagacgaaaacgacttactgct
cattttgaagacttggagcagtgttacttttctacaaggatgtctcgtatctcagatgac
agtcgaactgcaagccagttggatgaatttcaggaatgcttgtccaagtttactcgatat
aattcagtacggcctttagccacattgtcatatgctagtgatctctataatggttccagt
atagtctctagtattgaatttgaccgggattgtgactattttgcaattgctggggttaca
aagaagattaaagtctatgaatatggcactgtcatccaggatgcagtggatattcattat
cctgagaatgaaatgacctgcaattcgaaaatcagctgtatcagttggagtagttaccat
aagaacctgttagctagcagtgattatgaaggcactgttattttatgggatggattcacg
ggacagaggtcaaaggtctatcaggagcatgagaagaggtgttggagtgttgactttaat
ttgatggatcctaaactcttggcttcaggttctgatgatgctaaagtgaagctgtggtct
accaatctagacaactcagtggcaagcattgaggcaaaggctaatgtgtgctgtgttaaa
ttcagcccctcttccagataccatttggctttcggctgtgcagatcactgtgtccactac
tatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgtaaagcagtc
tcttacgcaaagtttgtgagtggtgaggaaattgtctctgcctctacagacagtcagcta
aaactgtggaatgtaggaaaaccgtactgcctacgttctttcaagggtcatatcaatgaa
aaaaactttgtaggcctggcttccaatggagattatatagcttgtggaagtgagaataac
tctctgtacctgtactataaaggactttctaagactttgctaacttttaagtttgataca
gtcaaaagtgttctggacaaagaccgaaaagaagatgatacaaatgaatttgttagtgct
gtgtgctggagggcactaccagatggggagtccaatgtgctgattgctgctaacagtcag
ggtacaattaaggtaagctatttactgtatctccattttaaactcaggaccatttttaga
ctgaaacaggattatggaaatataccattgtactga
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