Macaca thibetana thibetana (Pere David's macaque): 126941426
Help
Entry
126941426 CDS
T08579
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
mthb04142
Lysosome
mthb04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
126941426
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
126941426
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
126941426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mthb02000
]
126941426
Transporters [BR:
mthb02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
126941426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
126941426
NCBI-ProteinID:
XP_050623951
LinkDB
All DBs
Position
18:57026622..57081472
Genome browser
AA seq
1294 aa
AA seq
DB search
MSARGLALGLLLLLLCLAQVFSQSCVWYGECGIAYGDKRYNCEYFGPPKPLPKDGYDLVQ
ELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYFVGQSFANAMYNACRDVEAPSSNDKALGLLCGKD
ADACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSC
QDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGMAWLLTSTLPSSPALPGEASCCDPVSAAFEGCLRRLFTRWG
SFCVRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPIDLWSAPSSQARLEKEYFDQHFGPFF
RTEQLIIRAPLTDKHTYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVT
LQDICLAPLSPYNTNCTIMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASL
NDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAW
EKEFINLVRNYKNPNLTISFSAERSIEDELNRESDSDIFTVVISYAIMFLYISLALGHIK
SCRRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGLPLTLIVIEVIPFLVLAVGVDNIF
ILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSLF
AGLAVFIDFLLQITCFVSLLGLDINRQEKNRLDIFCCVRGAEDGTSVQASESCLFRFFKN
SYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQFLSMPDDSYVVDYFKSMSQYL
HAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWI
DDYFDWVKPQSSCCRVDNITDQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFL
SDNPNPKCGKGGHAAYSSAVNILGNGTRVGATYFMTYHTVLQTSADFIDALKKARLIASN
VTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSA
VIMCTTIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRV
ERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFL
PVLLSYIGPSVNKAKSCAAEERYKGTERERLLNF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcgcggcctggcccttggcctcctcctgctgctactgtgtctggcgcaggtg
ttttcacagtcctgtgtttggtatggagagtgtggaattgcatatggggacaagaggtac
aattgcgaatattttggcccaccaaaaccattaccaaaggatggatatgacttagtgcag
gaactctgtccgggattcttctttggcaatgtcagtctctgttgtgatgttcagcagctc
cagacactaaaagacaatttgcagctgcctctacagtttctgtccagatgtccatcctgt
ttttataacctactgaacctgttttgtgagctgacatgtagccctcgacagagtcagttt
ttgaatgttacagcaactgaagattatgttgatcctgttacaaaccagacgaaaacaaat
gtgaaagagttacagtactttgtcggacagagttttgccaatgcaatgtacaatgcctgc
cgggacgtggaggccccctcaagtaatgacaaggccctgggactcctgtgtgggaaggac
gctgatgcctgtaatgccaccaactggattgaatacatgttcaataaggacaacggacag
gcaccttttaccatcactcccgtgttttcagattttccagtccatgggatggagcccatg
aataatgctaccaaaggctgtgatgagtctgtggatgaagtcacagcaccgtgtagctgc
caagactgctctattgtctgtggccccaagccccagcccccgcctcctcctgctccctgg
acaatcctcggcttggacgccatgtatgtcatcatgtggatcacctacatggcatttttg
cttgtgttttttggagcattttttgcagtgtggtgctacagaaaacggtattttgtctcc
gagtacactcccatcgatagcaatatagctttttctgttaatgcaagtgacaaaggaatg
gcttggctcttaacctccaccctcccttcctctcccgctcttccaggagaggcgtcctgc
tgcgaccctgtcagtgcagcctttgagggctgcttgaggcggctgttcacacgctggggg
tctttctgcgtccgaaaccctggctgtgtcattttcttctcgctggtcttcattgctgtg
tgttcgtcgggcctggtgtttgtccgggtcacaaccaatccgattgacctctggtcagcc
cccagcagccaggctcgcctggagaaggagtactttgaccagcactttgggcctttcttc
cggacggagcagctcatcatccgggcccctctcactgacaaacacacttaccagccgtac
ccttcgggagccgatgtaccctttggacctccgcttgacatacagatattgcaccaggtt
cttgacttacaaatagccatcgaaaacattactgcctcttacaacaatgagactgtgaca
cttcaggacatctgcttggccccgctctcaccatataacacgaactgcaccattatgagc
gtgttaaattacttccagaacagccattccgtgctggatcacaagaaaggggacgacttc
tttgtgtatgccgattaccacacgcactttctgtactgcgtacgggcccctgcctctctg
aatgatacaagtttgctccatgatccttgtctgggtacgttcggtggaccagtgttccca
tggcttgtgttgggaggctatgatgatcaaaactacaataacgccactgcccttgtgatt
accttccctgtcaataactactataatgatacagagaagctccagagggcccaggcctgg
gaaaaagagtttattaatttggtgagaaactacaagaatcccaatctgaccatttccttc
agtgctgaacgaagtattgaagatgagctaaatcgtgaaagtgacagtgatatcttcacc
gttgtaattagctatgccatcatgttcctatatatttccctagccttggggcacatcaaa
agctgtcgcaggcttctggtggattcgaagatctcactaggcatcgcgggcatcctgatc
gtgctgagctcggtggcttgctccttgggcatcttcagctacattgggttgcccttgacc
ctcattgtgattgaagtcatcccgttcctggtgctggctgttggagtggacaacatcttc
attctggtgcaggcctaccagagagatgaacgtcttcaaggggaaaccctggatcagcaa
ctgggcagggtcctaggagaagtggctcccagtatgttcctgtcatccttttctgagact
gtagcatttttcttaggagcaatgtccgtgatgccagccgtgcacacgttctctctcttt
gcgggactggcagtcttcattgactttcttctgcagattacctgtttcgtgagtctcttg
gggttagacattaatcgtcaagagaaaaatcggctagacatcttttgctgtgtcagaggt
gctgaagatggaacaagcgtccaggcctcagagagctgtttgtttcgcttcttcaaaaac
tcctattctccacttctgctaaaggactggatgagaccaattgtgatagcaatatttgtg
ggtgttctgtcattcagcatcgcagtcctgaacaaagtagatattggattggatcagttt
ctttcgatgccagatgactcctacgtagtggattatttcaaatccatgagtcagtacctg
catgcgggtccgcctgtgtactttgtcctggaggaagggcacgactacacttctcccaag
gggcagaacatggtgtgcggtggcatgggctgcaacaacgattccctggtgcagcagata
tttaatgcggcgcagctggacaactatacccggataggcttcgccccctcgtcctggatc
gacgattatttcgactgggtgaagccgcagtcatcttgctgtcgagtggacaacatcact
gaccagttctgcaatgcttcagtggttgaccctgcctgcgtccgctgcaggcctctgact
ccggagggcaaacagaggccgcaggggggagacttcatgagattcctgcccatgttcctt
tcggataaccccaaccccaagtgcggcaaaggggggcatgctgcctacagctccgcagtt
aacatcctcggcaatggcaccagggtcggagccacgtacttcatgacctaccacactgtg
ctgcagacctctgctgactttattgatgctctgaagaaagcccgacttatagccagtaat
gtcaccgaaaccatgggcattaatggcagtgcctaccgggtatttccctacagtgtgttt
tatgtcttctacgaacagtacctgaccatcattgacgacactatcttcaacctcggtgtg
tccctgggcgcgatatttctggtgaccatggtcctcctgggctgtgagctgtggtctgca
gtcatcatgtgcaccaccatcgccatggtcttggtcaacatgtttggagttatgtggctc
tggggcatcagtctgaacgccgtgtccttggtcaacctggtgatgagctgtggcatctcc
gtggagttctgcagccacataaccagagcgttcacggtgagcacgaaaggcagccgtgtg
gagcgtgcagaagaggcactcgcccacatgggcagctccgtattcagtggaatcacgctt
acaaaatttggagggattgtggtgttggcttttgccaaatctcaaattttccagatattc
tacttcaggatgtatttggctatggtcttactgggcgccactcacggattaatatttctc
cctgtcttactcagttacatagggccatcagtaaataaagccaaaagctgtgccgctgaa
gagcgatacaaagggacagagcgcgaacggcttctaaatttctag
DBGET
integrated database retrieval system
