Macaca thibetana thibetana (Pere David's macaque): 126942509
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Entry
126942509 CDS
T08579
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126942509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126942509
03041 Spliceosome [BR:
mthb03041
]
126942509
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126942509
Spliceosome [BR:
mthb03041
]
Complex B
Other components
Prp19-related factors
126942509
Complex C
126942509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
126942509
NCBI-ProteinID:
XP_050626132
LinkDB
All DBs
Position
19:16514079..16524831
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagttcaaacagggcgccccgaagcccaggctcaatcagctatatgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgactgaccccgcctacgaagatgtgaacaactgtcatgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacacacccgccgcacctttgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgcccgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaacgacgagcgtttcgtgtctaaggccggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgtgggggccttacccgcttcaccgaccagctgggcaagctctggtgt
tcgctcgccgactactacatccgcagcggccacttcgagaaggctcgggatgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacgcaggtgtttgacagctatgcc
cagtttgaggagagcatgattgccgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggacgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccga
cgtcccctgctgctcaacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtgg
cacaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagttggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggccacg
gcgctgcctgcccgccgggccgagtactttgatggctcagagcctgtgcagaaccgcgtg
tacaagtcgctgaaggtctggtccatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaagccgtgtatgaccgcatcctggacctgcgcatcgcgacaccccagatc
gtcatcaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcgcgggacctgttt
gaacaggctctggatggctgtcccccaaaatatgccaagaccttgtacctgctgtacgca
cagctggaggaggagtggggcctggctcggcatgccatggccgtgtacgagcgtgccacc
agggctgtggagcccgcccagcagtatgacatgttcaacatctacatcaagcgggcggcg
gagatctatggggtcacgcacactcgcggcatctaccagaaggccattgaggtgctgtcg
gacgagcatgcgcgtgagatgtgcctgcggtttgcagatatggagtgcaagctcggggag
atcgaccgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacaacc
ggcgcgttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcgtatccggcgcagcgtgcaggccacgtacaacacacaggtcaacttc
atggcctcgcagatgctcaaggtctccggcagtgccacgggcaccgtgtctgacctggcc
cccgggcagagcggcatggacgacatgaagctgctggaacagcgggcagagcagctggca
gctgaggcggagcgcgaccagccctcgcgtgcccagagcaagatcctgttcgtgaggagt
gacgcctcccgggaggagctggcggagctggcacagcaggtcaaccctgaggagatccag
ctgggcgaggacgaggatgaggacgagatggacctggagcccaacgaggttcggctggag
cagcagagcgtgccagccgccgtgttcggcagcctgaaggaagactga
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