Macaca thibetana thibetana (Pere David's macaque): 126943317
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Entry
126943317 CDS
T08579
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126943317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126943317
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126943317
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126943317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
126943317
NCBI-ProteinID:
XP_050627852
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Position
19:34635447..34653407
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AA seq
751 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPSATSGPSTTQPRPPSAQPGGGGGGGGGSGSNSNSSAGGGAGK
QNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGG
VAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSS
LKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPL
GPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEF
YQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQG
TYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttacagtaaggagggcctgggcctggcccagaaggtagatcctgcccagaaggag
aaggaagaggttggccagtggctcacgaataccatcgacacgctcaacatgcaggtggac
cagtttgagagtgaggtggagtcactgtcagtgcagacacgcaagaagaagggcgacaag
gatcagaagcaggaccggatcgagggcttgaagcggcacatcgagaagcaccgctaccac
gtgcgcatgctagagaccatcctgcgcatgctggacaatgactccatccttgttgatgcc
atccgcaagatcaaggatgacgttgagtactatgtcgactcatcccaggaccccgacttc
gaggagaacgagtttctctacgatgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagc
acacccacctcgaccacctccagctctcccatcccgcccagcccagccaactgtaccacg
gaaaactctgaagatgataagaagaggggacgttccacagacagtgaagtcagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtg
ccgcccacctacccctccggccccccgcctgctgcctctgccttgagcaccactcctggc
aacaacggggtccccgccccagcagcacccccaagtgccctgggtcccaaggccagtcca
gctcccagccacaactcgggcacccctgccccctatgcccaggctgtggccccatcggct
accagtgggcccagcacgacccagccccggccccccagcgcccagcctggcggaggcggc
ggcggaggtggagggagcggcagcaatagtaacagcagtgccggtggaggggctggcaag
cagaatggcgccaccagttacagctcagttgtggcagacagcccggcagaggtggctttg
agcagcagtgggggcaacaatgccagcagccaggccctgggccccccttccggcccccac
aacccacctcccagcacctcgaaggaacccagtgcggcagccccaacaggggctgggggc
gtggccccaggctcagggaacaactcagggggacccagcctcctggtgccactgcctgtg
aatcctcccagctccccaacgcccagcttcagtgatgccaaggcagccggtgccctactc
aatgggcctccacagttcagcaccgccccggaaatcaaggcccctgagcctctgagctcc
ttgaagtccatggcggaacgggcagccatcagctctggcattgaggaccctgtgccaacg
ctgcacctgactgagcgagacatcatcctgagcagcacatcagcacctccggcctcagct
cagccacccctgcagctgtcagaggtgaacataccgctgtcgctgggtgtctgtccgctg
ggccctgtgcccctcaccaaggagcagctctaccagcaggccatggaagaggccgcctgg
caccacatgccccacccctctgactctgagcgtatccggcagtacctcccccggaacccc
tgtccgacgcccccctaccaccaccagatgccacccccacactcggacactgtggagttc
taccagcgcctgtcgaccgagacactcttcttcatcttctactatctggagggcactaag
gcacagtacctggcagccaaggccctaaagaagcagtcgtggcgattccacaccaagtac
atgatgtggttccagaggcacgaggagcccaagaccatcactgacgagtttgagcagggc
acctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcaccttt
gagtaccgctacctggaggaccgggacctccagtga
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