Macaca thibetana thibetana (Pere David's macaque): 126943421
Help
Entry
126943421 CDS
T08579
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03022
Basal transcription factors
mthb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126943421
09124 Replication and repair
03420 Nucleotide excision repair
126943421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthb03021
]
126943421
03400 DNA repair and recombination proteins [BR:
mthb03400
]
126943421
Enzymes [BR:
mthb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126943421
Transcription machinery [BR:
mthb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126943421
DNA repair and recombination proteins [BR:
mthb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126943421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
nSTAND3
Motif
Other DBs
NCBI-GeneID:
126943421
NCBI-ProteinID:
XP_050628050
LinkDB
All DBs
Position
19:complement(26119019..26138463)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL
KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLQRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctcctggtctacttcccttacgactacatctaccccgag
cagttctcctacatgcgggagctcaaacgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcataccag
cgggcatatccgctggaggtgaccaaactcatctactgctcaagaactgtgccggagatt
gagaaggtgatcgaagagcttcgaaagttgctcaacttctatgagaagcaggagggcgag
aagctgccatttctggggctggctctgagctcccgcaaaaacttgtgtattcaccctgag
gtgacacccctgcgctttgggaaggatgtcgatgggaaatgccacagcctcacagcctcc
tatgtgcgggcgcagtaccagcatgacaccagcctgccccactgtcgcttctatgaggaa
tttgatgcccatgggcgcgaggtgcccctccccgctggcatctacaacctggatgacctg
aaggccctggggcggcgccagggctggtgcccatacttccttgctcgatactcaatcctg
catgccaacgtggtggtttatagctaccactacctcctggaccccaagattgcagacctg
gtgtccaaggaactggcccgcaaggccgtcgtggtcttcgacgaggcccacaacattgac
aacgtctgcatcgactccatgagcgtcaacctcacccgccggacccttgaccggtgccag
ggcaacctggagaccctgcagaagacggtgctcaggatcaaagagacagacgagcagcgc
ctgcgggatgagtaccggcgtctggtggaggggctgcgggaggccagcgccgcccgggag
acggacgcccacctggccaacccggtgctgcccgacgaggtgctgcaggaggcggtgcct
ggctccatccgcacggccgagcacttcctgggcttcctgcggcggctgctggagtacgtg
aagtggcggctgcgtgtgcagcacgtggtgcaggagagcccacccgccttcctgagtggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcagattctgtgctgaacgcctgcgg
tccctgctgcacaccctggagatcaccgaccttgctgacttctccccgctcaccctcctt
gctaactttgccacccttgtcagcacctacgccaaaggcttcaccatcatcatcgagccc
tttgacgacagaaccccaaccattgccaaccccatcctgcacttcagctgcatggacgcc
tcgctggccatcaaacctgtattcgagcgcttccagtctgtcatcatcacgtctgggaca
ctgtccccgctggacatctaccccaagatcctggacttccaccccgtcaccatggcaacc
ttcaccatgacgctggccagggtctgcctctgccctatgatcatcggccgtggcaatgac
caggtggccatcagctccaaatttgagacccgggaggatattgctgtgatccggaactac
gggaacctcctgctggagatgtctgctgtggtccctgatggcatcgtggccttcttcacc
agctaccagtacatggagagcaccgtggcctcctggtatgagcaggggatccttgagaac
atccagaggaacaagctgctctttattgagacccaggatggtgccgaaaccagtgtcgcc
ctggagaagtaccaggaggcctgcgagaacggacgcggggccatcctgctgtcagtggcc
cggggcaaagtgtctgagggaatcgacttcgtgcaccactacgggcgggccgtcatcatg
tttggcgtcccctacgtctacacacagagtcgcattctcaaggcacggctggaatacctg
cgggaccagttccagattcgtgagaatgactttctcaccttcgatgccatgcgccacgcg
gcccagtgtgtgggtcgggccatccggggcaagacggactacggcctcatggtctttgcc
gacaagcggtttgcccgtggggacaagcgggggaaactgccccgctggatccaggagcac
ctcacagatgccaacctcaacctgactgtggatgagggtgtccaggtggccaagtacttc
ctgcggcagatggcacagcccttccaccgggaggatcagctgggcctgtccttgctcagc
ctggagcagctggaatcagaggagacgctgcagaggatagagcagattgctcagcagctc
tga
DBGET
integrated database retrieval system
