KEGG   Macaca thibetana thibetana (Pere David's macaque): 126943547
Entry
126943547         CDS       T08579                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mthb  Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03030  DNA replication
mthb03410  Base excision repair
mthb03420  Nucleotide excision repair
mthb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mthb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126943547
   03410 Base excision repair
    126943547
   03420 Nucleotide excision repair
    126943547
   03430 Mismatch repair
    126943547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthb03032]
    126943547
   03400 DNA repair and recombination proteins [BR:mthb03400]
    126943547
Enzymes [BR:mthb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     126943547
    6.5.1.6  DNA ligase (ATP or NAD+)
     126943547
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     126943547
DNA replication proteins [BR:mthb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    126943547
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     126943547
DNA repair and recombination proteins [BR:mthb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     126943547
   NER (nucleotide excision repair)
    Other NER factors
     126943547
   MMR (mismatch excision repair)
    Other MMR factors
     126943547
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase PucR DUF1685
Other DBs
NCBI-GeneID: 126943547
NCBI-ProteinID: XP_050628345
LinkDB
Position
19:complement(28757865..28809192)
AA seq 919 aa
MQRSIMSFFHPKKEGKAKKPEKEASNGSRETEPPPKAALKEWNGVVSESDSPVKRPGRKA
ARVLGSEGEEEDEALSPAKGQKPAPDCSQVSPPRPATSPENNASLSDTSPTDSSPSGIPK
RRTARKQLPKRTIQEVLEEQSADEDREAKRKKVEEEVETPEESLTEAEVATEKEGEDRDQ
PTTPPKPLKTSEAETLTESVSEPEVATRQELQEEEEQTKPPRSAPKTLSSFFTPRKPAIK
KEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIE
EVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ
ATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSAST
AKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAGQSVLAALSQAVSLTPPGQEFPPAV
VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPL
KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD
IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAF
DLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCE
GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLL
ASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPSA
VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ
SQIQNQQGEDSGSDPEDTY
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgcagcgaagtatcatgtcattcttccaccccaagaaagagggtaaagcgaagaagcct
gagaaggaggcatccaacggcagcagagagacggagccccctccgaaggcggcactgaag
gagtggaatggagtggtgtccgagagtgactctccagtgaagaggccaggcaggaaggcg
gcccgggtcctgggcagcgaaggggaagaggaggatgaagcccttagccctgctaaaggc
cagaagcctgccccagactgctcacaggtctccccgccccgtcctgccacatctcctgaa
aacaacgcttccctctctgacacctctcccacggacagctccccatcagggatcccgaag
cgtcgcacagctcggaagcagctcccgaaacggaccattcaggaagtcctggaagagcag
agtgcggacgaggacagagaagccaaaaggaagaaggtggaggaagaagtggagacccca
gaagaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacagggaccag
cccaccacacctcccaagcccctaaagacctctgaagcagagaccctgacggaaagcgtt
tcggagcccgaggtggccacgaggcaggaactgcaggaggaggaagagcagaccaagcct
ccccgcagcgctcccaagacgctcagcagcttcttcacgccccggaagccagcaatcaaa
aaagaagtgaaggaggaggagccaggggctccaggaaaggagggagctgctgagggaccc
ctggacccatccggttacaatcctgccaagaacaactaccatcccgtggaagacgcctgc
tggaaaccgggccagaaggtcccttacctggccgtggcccggacgtttgagaagatcgag
gaggtgtctgcccggctccggatggtggagacactgagcaacttgctgcgctccgtggtg
gccctgtcgcctccagacctcctcccggtcctctacctcagcctcaaccaccttgggcca
ccgcagcagggcctggagcttggcgtgggtgatggcgtccttctcaaggcagtggcccag
gccacaggtcggcagctggagtccgtccgggctgaggcagccgagaagggcgacgtggga
ctggtggccgagaacagccgcagcacccagaggctcatgctgccaccacctccgctcact
gcttccggggtcttcagcaagttccgtgacatcgccaggctcactggcagtgcttccaca
gccaagaagatagacatcatcaaaggcctctttgtggcctgccgccactcagaagcccgg
ttcatcgccaggtccctgagcggacggctgcgccttgggctggcagggcagtcggtgctg
gccgccctctcccaggctgtgagcctcacgcccccaggccaagaattcccaccagccgtg
gtagatgctgggaagggcaagacagcagaggccagaaagacgtggctggaggagcaaggc
atgatcctgaagcagacattctgcgaggtgcccgatctggaccgaattatccccgtgctg
ctggagcacggcctggaacgtctcccggagcactgcaagctgagcccagggattcccctg
aaaccaatgttggcccatcccacgcggggtgtcagtgaggtcctgaaacgctttgaggag
gcagctttcacctgcgaatacaaatacgatgggcagagggcacagatccacgccctggaa
ggcggggaggtgaagatcttcagcaggaatcaggaagacaacactggaaagtacccggac
atcatcagccgcatccccaagattaaactcccatcggtcacatccttcatcctggacact
gaagccgtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacc
cgcaaacgcaaggaagtggatgcgtccgagatccaggtgcaggtgtgtttgtacgccttc
gacctcatctacctcaatggagagtccctggtacgtgagcccctttcccggcgccggcag
ctgctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctctctggac
accaaggacgtcgagcagatcgccgagttcctggagcagtcggtgaaagactcctgcgag
gggctgatggtgaagaccctggatgtcgatgccacctacgagatcgccaagagatcgcac
aactggctcaagctgaagaaggactaccttgatggcgtgggtgacaccctggacctggtg
gtgatcggcgcctacctgggccgggggaagcgggccggccggtacgggggcttcctgctg
gcctcctatgacgaggacagtgaggagctgcaggccatatgcaagcttggaactggcttc
agcgacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagcccc
cgcccttatgtgcggatagatggtgccgtgactcccgaccactggctggaccccagcgcc
gtctgggaggtgaagtgtgccgacctctccctctcccccatctaccctgctgcgcggggc
ctggtggatagtgacaaggggatctcccttcgcttccctcggtttattcgagtccgtgaa
gacaagcagccggagcaggccaccaccagtgcacaggtggcctgtttgtaccggaagcaa
agtcagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactaa

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