Macaca thibetana thibetana (Pere David's macaque): 126944380
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Entry
126944380 CDS
T08579
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03440
Homologous recombination
mthb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126944380
03460 Fanconi anemia pathway
126944380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthb03400
]
126944380
DNA repair and recombination proteins [BR:
mthb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
126944380
FA (Fanconi anemia) pathway
Downstream FA components
126944380
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
zinc_ribbon_16
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
126944380
NCBI-ProteinID:
XP_050629779
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Position
20:53739911..53778191
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AA seq
1184 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKIKHSIKKTVEEQDYLSQ
QELSPQLNHSEPKNKICVYDKLHIKTHLDEETGERTSVTLDVGPESFNPGDGPGGLPIHG
TDDTQEHFPHRVSDPDGEQKQKLPGRGKQQQKRTLISQERDCVFGTDSLRLSGKRLKEQE
ETSSKNPTRSPVTEIRTHLLSLKSELPDSPEPVTETNEDSIFIPPTAQPEKGVDTLLRRP
DFTRATTVPLQTPTDSSSSQHLEHIPPKGSSELTTHSLKNIRFTSPVSLEAQGKKVTIPT
DNLVVNKAVSKSGQLPTSSNLEADISCSLNELTHDNLPANENQNLEQNQTEKSLKSPGDA
LDGRNENLQENEILSQPKSLSLEATSLLAAEKHSCTMLEGLLFPAEYYVRTTRSMSNCQR
KVALEAVIQSHLDVKKKGFKNKNKDASKNLNLSNEETDQSEIRMSDTCTGQPSSRTSQKL
LSLTKVSSPAGPTEDNDLSRKAVAQAPSRRYRGKRKSACTPASDHCEPLLPACNPSVINR
SKEEVTSHKYQNKKAVIRVKGKKSNQKEDSLSWSNSAYLSLDDDAFTASFHKDGMLSLKQ
LLSFLSITDFQLPDEDFGPLKLEKLKSCSEKPVEPFESNMFGERRLKEGNCIFPEELSPK
RMDTEMEDLEEDLIVLPGKSHPKRPNPQSQHTKTGLSSSILLYTPLNTVALDDNDRPAAD
MCSPLFPILGTTPAFGPQGSYEKASTEVAGQTCRTPQLAHLKDSVCLASDSKQFDRSSSP
AKPHTTLQVSGRQGQPTCDCDSALPGTPPPIESFTFKVNQLCGNTCQELHKHSIEQTETA
ELPASDSVNPGNLQLVSKLKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALD
AWQWEKLYTWHFTEVPVLQIVPVPDVYNLVCVALGNLEIREIRALLCSSDDESEKQVLLK
SGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM
QEALLGTTVMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKES
ESLQSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDQCAAAILTSGTIAIWDL
LLGQCTALLPPISDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaggaaaagttaaaggagaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgcccaaaga
gctgaaaagattaagcattctattaagaaaacagtagaagaacaagattatttgtcccag
caggagctctcaccgcagctaaaccactcagaacctaaaaataaaatatgtgtttatgac
aagttacacatcaaaacccatcttgatgaagaaactggagaaaggacatctgtcacactt
gatgttgggccggagtcctttaaccctggagatggcccaggaggattacctatacacgga
acagatgacacccaagaacattttccccacagggtcagtgaccctgatggtgagcaaaag
cagaagctgccagggagaggaaagcagcagcagaagagaacattgatttcacaagagaga
gactgtgtctttggcactgattcactcagactgtctgggaaaagactaaaggaacaggaa
gaaaccagtagcaaaaatcctactagatcaccagtaactgaaataagaactcacctttta
agtctgaagtctgaacttccagattctccagaaccagttacagaaactaatgaagacagt
atattcattccaccaactgcccaaccagaaaaaggtgtggatacactcctaagaagacct
gatttcaccagggcgactacagttcctttacagactccaacagatagcagtagtagtcag
caccttgaacacattcctcccaaaggcagcagtgaacttactactcacagcctaaaaaac
attagatttacttcacctgtaagtttggaggcgcaaggcaaaaaagtgactatccctaca
gataacctcgttgtaaacaaagctgtaagtaaaagtggccaactgcccacaagttctaat
ttagaggcagatatttcatgttctctaaatgaactcactcacgataacttgccagcaaat
gaaaatcaaaacttagaacaaaatcaaacagagaaatctttaaagtctcccggtgacgct
cttgatggtagaaatgaaaatcttcaggaaaacgagattctaagtcaacctaagagtctt
agcctggaagcaacctctcttcttgctgcagaaaaacattcttgcacaatgcttgaaggc
cttctgtttcctgcagaatactatgttagaacaacacgaagcatgtccaattgccagaga
aaagtagccctggaggctgtcattcagagtcatttggatgtcaagaaaaaagggtttaaa
aataaaaataaggatgcaagtaaaaatttaaacctttccaatgaggaaactgaccaaagt
gaaattaggatgtctgacacatgcacaggacaaccaagttcaagaacttctcagaaactt
ctctcattaactaaagtcagctctcccgctgggcccactgaagataatgacttgtctagg
aaggcagttgcccaggcacctagtagaagatacagaggaaaaagaaaatcagcctgcacc
ccagcatcagatcattgtgaaccacttttgccagcttgcaacccatcagttattaacagg
tccaaggaggaagtcacctcacataaatatcagaacaaaaaagcagttattcgagtgaaa
gggaagaaaagtaatcaaaaagaggattccctttcttggagtaacagtgcttatttatcc
ttggatgatgatgctttcacggcttcatttcataaggatggaatgctgagcttaaagcaa
ctactgtcttttctcagcatcacagactttcagttacctgatgaagactttggacctctt
aagcttgaaaaactgaagtcttgctcagaaaaaccagtggagccttttgaatcaaacatg
tttggagagagacgtcttaaagagggaaattgtatttttccagaggaactgagtcctaaa
cgcatggatacagaaatggaggacttagaagaggaccttattgttttaccaggaaaatca
catcccaaaaggccaaacccacaaagccagcatacaaagacaggcctttcttcatccata
ttactttatactcctttaaatacagttgcgcttgatgataatgacaggcctgctgcagac
atgtgttcacctcttttccccatcttaggtactactccagcctttggccctcaaggctcc
tatgaaaaagcttccacagaggtcgctggacaaacttgccgcacaccccaacttgctcat
ttgaaagactcagtctgtcttgccagtgatagtaaacaattcgaccgttcaagcagtcca
gcaaaaccacataccaccctgcaggtgtcaggcaggcaaggacaacctacctgtgactgt
gactctgccctgccaggaacacctccacccattgagtcattcacttttaaagtaaatcag
ctctgtggaaacacatgccaggagttgcataaacattccatcgaacagactgaaacagca
gagcttcctgcttctgatagcgtaaacccaggcaacctacaattggtttcaaagttaaag
aatccttcaggttcctgttccgtagatgtgagtgccatgttttgggaaagagccggttgt
aaagagccatgtatcataactgcttgcgaggacgtagtttctctttggaaagctctggat
gcttggcagtgggaaaaactttatacttggcacttcacagaggttccagtattacagata
gttccagtgcctgatgtgtataatcttgtgtgtgtagctttgggaaatttggaaatcaga
gagatcagggcattgctttgttcctctgatgatgaaagtgaaaagcaagtactactgaag
tctggaaatataaaagctgtgcttggcctgacaaagaggaggctagttagtagcagtggg
accctttctgatcaacaagtagaagtcatgacatttgcagaagatggaggaggcaaagaa
aaccaatttttgatgccccctgaggagactatattaacttttgccgaggtccaagggatg
caagaagctctccttggtactactgttatgaacaacattgttatttggaatttaaaaact
ggtcaactcttgaaaaagatgcacattgatgattcttaccaagcttcagtctgtcacaaa
gcctattctgaaatggggcttctgtttattgtcctgagtcatccctgtgccaaagagagt
gagtcgttgcaaagccctgtgtttcagctgattgtgattaaccctaagacgactctcagt
gtgggtgtgatgctgtactgtcttcctccagggcaggctggcaggttcctggaaggtgac
gtgaaagatcaatgtgcagcagcaatcttgacttctggaacaattgccatttgggactta
cttctcggtcagtgtactgccctcctcccacctatctctgaccaacattggtcttttgtg
aagtggtcaggtacagactctcatttgctggctggacaaaaagatggaaatatatttgta
taccactactcgtaa
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integrated database retrieval system
