Macaca thibetana thibetana (Pere David's macaque): 126946522
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Entry
126946522 CDS
T08579
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03030
DNA replication
mthb03420
Nucleotide excision repair
mthb03430
Mismatch repair
mthb03440
Homologous recombination
mthb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126946522
03420 Nucleotide excision repair
126946522
03430 Mismatch repair
126946522
03440 Homologous recombination
126946522
03460 Fanconi anemia pathway
126946522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mthb03000
]
126946522
03032 DNA replication proteins [BR:
mthb03032
]
126946522
03400 DNA repair and recombination proteins [BR:
mthb03400
]
126946522
Transcription factors [BR:
mthb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
126946522
DNA replication proteins [BR:
mthb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
126946522
DNA repair and recombination proteins [BR:
mthb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
126946522
MMR (mismatch excision repair)
126946522
DSBR (double strand breaks repair)
HR (homologous recombination)
126946522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
126946522
NCBI-ProteinID:
XP_050632900
LinkDB
All DBs
Position
X:complement(54583936..54585993)
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AA seq
616 aa
AA seq
DB search
MVGQLSEGAIATIMQQGDTSIKPILQVINIPPITMGNSPPCYRLLVSDGLNXLSSFMLAT
QLNPLVEQEQLSSNCVCQINXFIMNTLKDGRRVVILMELEVLKSAEVVGVKIGNPVPYNE
GHGQPQAAPPVSAGSPVASSKPQQXHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGT
QSKVVPIASLTPYQFKWTICAHVTNKSQICTWSNSRGEGKRFSLELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFPKGTLKIANKQFTAVKNDFEMTFNNETSVMPCEDGHHLPTVQF
DLTGIDDLENKMKDSLVEIMGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATL
WGEDADKFDGSRQPILAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQ
ALDGVSISDLKSGSVGGGNTNWKTLYEVKFENLGQSNKPDYFSSVATVVYPRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDTEFPNFKYHMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGDLKDKNEQAFEEVFQNANFRSFIFRVRVKVETYNEESRIKATVMDVKSVDYR
EYGRRLVLSIRRSASM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggcaactgagcgagggagccattgcgaccatcatgcagcagggggatacatcc
ataaagcccatcctccaagtcatcaacatccctcccattactatggggaatagtcctcca
tgttatcgactgcttgtgagtgatggattgaacnntctatcctctttcatgttggcaaca
cagttgaacccccttgtggagcaagaacaactgtccagcaactgtgtttgccagattaac
tgatttatcatgaacactttgaaagacggaaggagagtagttattttgatggaattagaa
gttttgaagtcagctgaagtagttggagtaaagattggcaatccagtgccctataatgaa
ggacacgggcagccacaagcagctcctccagtgtcagcaggcagcccagtggcaagcagc
aagccccagcaatagcacggaagctccggagcgggttccactgtttctaaggcttatggt
gcttcaaagacatttggaaaagctggaggtcccagcctgtcaaacacttctgggggaaca
cagtccaaagtggtgcccattgccagcctcactccttaccagttcaagtggactatttgt
gctcatgttaccaacaaaagtcagatctgtacctggagcaactcccgaggggaagggaag
cgtttctctctggaactggttgatgaaagtggtgaaatcagagctacagctttcaacgag
caagtggacaagttctttccccttattgaagtgaacaaggtgtattatttcccaaaaggc
accctgaagattgctaacaaacagttcacagctgttaaaaatgacttcgagatgaccttc
aataacgagacttccgtcatgccctgtgaagacggccatcatttacctacggttcagttt
gatctcacggggattgatgacctcgagaacaagatgaaagactcacttgtagaaatcatg
gggatctgcaagagctacgaagatgccactaaaatcacagtgaggtctaacaacagagag
gttgcgaagaggaatatctacttaatggacacatccgggaaggtggtgactgctacgctg
tggggggaagatgctgataaatttgatggttctaggcagcccatattggctatcaaagga
gccagagtctctgatttcggtggacggagcctctccgtgctgtcttcaagcactatcatt
gcgaatcctgacatcccggaggcctataagcttcgtggttggtttgacgcagaaggacaa
gccttagacggtgtttccatctctgatctaaagagcggcagtgttggagggggcaacacc
aactggaaaaccttgtacgaggtcaaattcgagaacctgggccaaagcaacaagccggac
tacttcagttctgtggccacagtggtgtatcctcgcaaagagaactgcatgtaccaagcc
tgcccgactcaggactgcaataagaaagtgattgatcaacagaacggattgtaccgctgt
gagaagtgcgacaccgaatttcccaatttcaagtaccacatgatcctgtcagtaaatatt
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgctgaagctatcctt
ggacaaaatgctgcttatcttggggatttaaaagataagaatgaacaggcatttgaagaa
gttttccagaatgccaacttccgatctttcatattcagagtcagggtcaaagtagagacc
tacaacgaagagtctcgaattaaggccactgtgatggacgtgaagtcggtggactacaga
gagtacggccgaaggctggtcctgagcatcaggagaagcgcgtcgatgtga
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