Macaca thibetana thibetana (Pere David's macaque): 126946614
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Entry
126946614 CDS
T08579
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04151
PI3K-Akt signaling pathway
mthb04382
Cornified envelope formation
mthb04510
Focal adhesion
mthb04512
ECM-receptor interaction
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05165
Human papillomavirus infection
mthb05200
Pathways in cancer
mthb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126946614
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126946614
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126946614
09142 Cell motility
04820 Cytoskeleton in muscle cells
126946614
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
126946614
09154 Digestive system
04974 Protein digestion and absorption
126946614
09158 Development and regeneration
04382 Cornified envelope formation
126946614
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126946614
09162 Cancer: specific types
05222 Small cell lung cancer
126946614
09172 Infectious disease: viral
05165 Human papillomavirus infection
126946614
09174 Infectious disease: parasitic
05146 Amoebiasis
126946614
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126946614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthb04147
]
126946614
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126946614
Exosome [BR:
mthb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126946614
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126946614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126946614
NCBI-ProteinID:
XP_050633116
LinkDB
All DBs
Position
X:complement(103794997..104210072)
Genome browser
AA seq
1687 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPS
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDG
ITGPQGAPGSPGAVGPAGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGEKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVAGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAG
LPGRDGLPGPPGPPGPPGPEFEAETLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGSPGPSGPKGK
KGEPILSTISGMPGDRGDSGSQGFPGVIGKPGNDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGPPGSKGITLPCIIPGSYG
PSGFPGTPGFPGPKGSRGLPGTPGQPGSSGNKGKPGSPGLVHLPELPGFPGPRGEKGLPG
FPGLPGKDGLPGTIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGDKGLLGDSGLPGL
KGVYGKPGLLGPKGERGSPGTPGPVGQPGTPGSSGPYGIKGKSGLPGAPGFPGTSGHPGK
KGTRGEKGPPGSIVKKGLPGLKGLPGNPGLIGLKGSPGSPGVAGLPALSGPKGEKGSVGF
VGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGHAGTPGEKGDRGNPGPVGIPGPRRPMSN
LWLKGDKGSQGSGGSDGFPGPRGDKGEAGQPGPPGLPGAPGLPGTIKGVSGKPGPPGFMG
IRGLPGLKGSSGITGFPGMPGESGSQGIRGSSGLPGTSGLPGLKGDNGQTLEISGSPGPK
GQPGESGFKGTKGRDGPIGNIGFPGNKGEDGKVGVSGDVGLRGAPGFPGVAGMRGEPGLP
GSSGHQGAIGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGNSLPSLIAGQPGDPGRP
GLDGERGRPGPPGPPGPTGPSSNQGNTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLK
GMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAPGQTPTAEAVQVPPGPLGL
PGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGF
EGAPGQQGPFGMPGMPGQSARVGYTLVKHSQSEQVPLCPIGMSQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQY
ISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSC
LEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRC
QVCMKSL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgacggaggaactggcagga
gcgggagagaagtcttatggaaagccgtgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcaagagggcgacctggaccaattggaattcaaggcccatca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggacccaaaggagataagggtcccatgggagttcctgga
tttcttggcatcaatgggattccgggccatcctggacagccgggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgtcggatttccaggccctgatggctat
cctgggcttctcggaccacctgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagcacccggatctcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggaactaccggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggactctggga
tttcctgggcttaatggattccaaggaattgagggtgaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagaccct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccagggcctgcgtggcccg
tctggtgtcgctggcttgccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcagctggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctggtccagaa
tttgaggccgaaactctacacaacaaagagccagggttccctggtctccgaggagaacaa
ggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccacggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggtctccgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacaatctcaggaatgccaggggatcggggtgattctggc
tcccagggcttccctggtgtaataggaaaaccaggcaacgatggagtaccaggtctacca
ggtctgccaggacttccgggtgatggtgggcagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccgggaattgggttacca
ggactgcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccctcctggatctaagggaatcaccctgccgtgtattattcctgggtcatacggt
ccatcaggatttccaggcactcccggattcccaggccctaaagggtcccgaggcctccct
gggaccccaggccagcctggatcaagtggaaataaaggaaagccagggagtccaggattg
gttcatcttcctgaattaccaggatttcctggacctcgtggggagaagggcttgcctggg
tttcctgggctccctggaaaagatggcttgcctgggacgattggcagtccaggtttacct
ggttccaagggagccactggtgacatctttggtgctgaaaatggtgctccgggggaacaa
ggcctacaaggattaacaggcgacaaaggacttcttggagactctggccttccaggactc
aagggtgtgtacgggaagcctggcttgctaggccccaaaggtgagcggggcagccctgga
acaccaggaccggtaggacagccaggcaccccaggatctagtggtccgtatggcatcaag
ggcaaatctgggctcccaggagcaccaggctttccaggcacctcagggcatcctggaaag
aaaggaacaagaggcgagaaaggccctcctggatcaattgtaaagaaagggctgccaggg
ctaaaaggccttcctggaaatccaggcctaatagggctgaaaggaagcccaggctctcca
ggggtcgctgggttgccagccctctctggacccaagggagagaaggggtctgttggattc
gtaggttttccaggaataccaggtctgcctggtattcctggaacaagaggattaaaggga
attccaggatcaaccggaaaaatgggaccatctggacacgctggcactcctggtgaaaag
ggagacagaggcaatccggggccagtcggaatacctggtccaagacgtccaatgtcaaac
ctttggctcaaaggagacaaaggctctcaaggctcaggcggatccgatggatttccaggg
ccaagaggtgacaaaggagaggctggtcaacctgggccaccaggcctgcctggagctcct
ggcctcccaggcactatcaaaggagttagtggaaagccaggtccccctggcttcatggga
atccggggcttacctggcctgaaggggtcctctgggataacaggtttcccaggaatgcca
ggagaaagtggttcacaaggtatcagagggtcgtctggactcccaggaacatctggtctc
ccaggcctgaaaggagacaatggccagacacttgaaatttccggtagcccaggaccgaag
ggacaacctggtgaatctggttttaaaggcacaaaaggaagagatggaccaataggcaat
ataggcttccctggaaacaaaggtgaagatggaaaagttggtgtttctggagatgttggc
cttcgtggagctccagggtttccaggggttgccggcatgagaggagaaccaggacttcca
ggctcttctggtcatcaaggggcaattgggcccctaggaccccccggattaataggaccc
aaaggcttccctggatttcctggtttacatggactgaatgggcttccgggcaccaagggt
acccatggcactccaggacctagtatcactggtgtgcctgggcctgctggtctccctgga
cccaaaggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctg
agagggcaaaaaggtgatcgaggtttcccaggtctccagggccctgctggtctccccggt
gccccaggcaactccttgccctcactcatagcaggacagcctggtgaccccgggcgacca
ggcctagatggagaacgaggccgcccaggcccccctggacccccaggtcccactgggcca
tcctcgaatcaaggcaacaccggagaccctggcttccctggaattcctggacctaaaggg
cctaagggagaccaaggaattccaggtttttctggccttcctggagagctaggactgaaa
ggcatgagaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagac
ccaggatttcccgggatgaaggggaaggcagggccaagaggctcttctggcccccaaggt
gctcctggacaaacacccactgcagaagctgtccaggttcctcctggacccttgggtctg
ccagggatcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggc
ctacaaggctccaaaggtttacctggcatccccggcaaagatggtcccagtgggctccca
ggcccacctggggctctcggtgatcctggtctgcctggactgcaaggccctccaggattt
gaaggagctccagggcagcaaggccccttcgggatgcctggaatgcctggccagagcgcg
agagtgggctacacgttggtaaagcacagccagtcggaacaggtgcccctgtgtcccatc
gggatgagccagctatgggtggggtacagcttactgttcgtggaggggcaagagaaagcc
cataaccaggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttc
atctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcctactgg
ctctccactactgcccctatccccatgatgcccgtcagccagacccagattccccagtac
atcagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggac
atcaccatcccacagtgccccctggggtggcgcagcctctggattgggtactccttcctc
atgcacactgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgc
ctagaggactttcgggccacccctttcattgagtgcagtggtgcccgaggcacctgccac
tactttgcaaacaaatacagtttctggttgaccacagtggaggagaggcagcagtttggg
gagttgcctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagtcgctgc
caggtgtgtatgaaaagcctgtag
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