Macaca thibetana thibetana (Pere David's macaque): 126948566
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Entry
126948566 CDS
T08579
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126948566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126948566
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126948566
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
126948566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
126948566
NCBI-ProteinID:
XP_050636478
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All DBs
Position
2:99204606..99238616
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AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTSIPRVRVLEDEEGSKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggcgctgagcgaggcggagaaggtgtacatcgtgcacggcgtccaggaa
gacctccgcgtggatggccgtggctgtgaggactaccgatgtgttgaagtggaaaccgat
gtggtgtccaacaccagtgggtccgccagggtcaagctgggtcacacagacatcttggtg
ggcgtgaaagcagaaatggggacgccgaagctggagaaaccaaatgaaggctacttggag
ttctttgttgactgttcagccaatgctacccctgaatttgaaggtagaggaggtgatgac
cttggcaccgagatcgctaacaccctctatcggatatttaacaataaaagcagtgtcgac
ttgaagaccctctgcattagtcctcgggagcactgctgggttctctatgtggatgtgcta
ctgctggaatgtggtggaaatttgtttgatgccatttccattgctgtaaaggctgctctc
ttcaatacaagcataccaagagttcgagttctggaggatgaagaggggtcgaaggacatc
gaattgtctgatgacccttatgactgcatacgactaagtgtggagaatgtcccctgcatt
gtcactctgtgcaagattggctatcggcatgtggtggatgctactcttcaggaggaggcc
tgctcgctggccagcttgctagtatcggtgaccagcaagggagttgtgacgtgcatgagg
aaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaag
cgtgtgggcaaagtgctgcatgcctccttgcagagtgttttgcacaaggaagaaagcctg
ggacccaagagacagaaagttggattcctgggatga
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