Macaca thibetana thibetana (Pere David's macaque): 126949926
Help
Entry
126949926 CDS
T08579
Name
(RefSeq) collagen alpha-2(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04151
PI3K-Akt signaling pathway
mthb04510
Focal adhesion
mthb04512
ECM-receptor interaction
mthb04611
Platelet activation
mthb04820
Cytoskeleton in muscle cells
mthb04926
Relaxin signaling pathway
mthb04933
AGE-RAGE signaling pathway in diabetic complications
mthb04974
Protein digestion and absorption
mthb05146
Amoebiasis
mthb05165
Human papillomavirus infection
mthb05205
Proteoglycans in cancer
mthb05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126949926
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126949926
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126949926
09142 Cell motility
04820 Cytoskeleton in muscle cells
126949926
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
126949926
09152 Endocrine system
04926 Relaxin signaling pathway
126949926
09154 Digestive system
04974 Protein digestion and absorption
126949926
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
126949926
09172 Infectious disease: viral
05165 Human papillomavirus infection
126949926
09174 Infectious disease: parasitic
05146 Amoebiasis
126949926
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
126949926
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126949926
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126949926
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126949926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
126949926
NCBI-ProteinID:
XP_050638860
LinkDB
All DBs
Position
3:73821085..73858090
Genome browser
AA seq
1274 aa
AA seq
DB search
MGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGR
PGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQ
TGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGN
AGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP
VGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGP
PGPPGLRGGPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGL
PGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGH
AGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGPAGEVGKPGE
RGLPGEFGLPGPAGARGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAAGT
AGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGD
RGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGV
VGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGP
AGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGI
LGLPGSRGERGLPGVAGVVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGN
DGPPGRDGQPGHKGERGYPGNNGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGA
VGPRGPSGPLGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQGAPGSVGPAGP
RGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGY
DGDFYRADQPRSAPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPE
WSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRSSKDKKHVWLGETI
NAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVIL
QGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGA
NQEFFVDIGPVCFK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaatgggacctagaggccctcctggtgcagctggagccccaggccctcaaggt
ttccaaggacctgctggtgagcctggtgaacctggtcaaactggtcctgcaggctctcgt
ggtccagctggccctcctggcaaggctggtgaagatggtcaccctggaaaacccggacga
cctggtgagagaggagttgttggaccacagggtgctcgtggtttccctggaactcctgga
cttcctggcttcaaaggcattaggggacacaatggtctggatggattgaagggacagccc
ggtgctcctggtgtgaagggtgaacctggtgcccctggtgaaaatggaactccaggtcaa
acaggagcccgtgggcttcctggtgagagaggacgtgttggtgcccctggccctgctggt
gcccgtggcagtgatggaagtgtgggtcccgtgggtcctgctggtcccattgggtctgct
ggccctccaggcttcccaggtgcccctggtcccaagggtgaaattggagctgttggtaac
gctggtcctgctggtcccgctggtccccgcggtgaagtgggtcttccaggcctctccggc
cccgttggacctcctggtaatcctggagcaaacggcctcactggtgccaagggtgctgca
ggccttcccggtgttgctggggctcctggcctccctggaccccgcggtattcctggccct
gttggtgctgctggtgctactggtgccagaggacttgttggtgagcctggtccagctggc
tccaaaggagagagcggtaacaagggtgagcccggctctgctgggccccaaggtcctcct
ggtcccagtggtgaagaaggaaagagaggccctaatggggaagctggatctgctggccct
ccaggacctcctgggctgagaggtggtcctggttctcgtggtcttcctggagctgatggc
agagctggtgtcatgggccctcctggtagtcgtggtgcaagtggccctgctggagttcga
ggccccaatggagatgctggtcgccctggggagcccggtctcatgggacccagaggtctt
cctggttcccctggaaatatcggccccgctggaaaagaaggtcctgtcggcctccctggc
atcgacggcaggcctggcccaattggcccagctggagcaagaggagagcctggcaacatt
ggattccctggacccaaaggccccactggtgatcctggcaaaaacggtgataaaggtcat
gctggtcttgctggtgctcggggtgctccaggtcccgatggaaacaatggtgctcaggga
cctcctggaccacagggtgtccaaggtggaaaaggtgaacagggtcccgctggtcctcca
ggtttccagggtctgcctggcccctcaggcccagctggtgaagttggcaaaccaggagaa
aggggtctccctggtgagtttggtctccctggtcctgctggtgcaagaggggaacgcggt
cccccaggtgagagtggtgctgccggtcctactggtcctattggaagccgaggtccttct
ggacccccagggcctgatggaaacaagggtgaacctggtgtggttggtgctgcaggcact
gctggtccatctggtcctagtggactcccaggagagaggggtgctgctggcatacctgga
ggcaagggagaaaagggtgaacctggtctcagaggtgaaattggtaaccctggcagagat
ggtgctcgtggtgctcctggtgctgtaggtgcccctggtcctgctggagccacaggtgac
cggggtgaagctggtgctgctggtcctgctggtcctgctggtcctcggggaagccctggt
gaacgtggtgaggtcggtcctgctggccccaatggatttgctggtcctgctggtgctgct
ggtcaacctggtgctaaaggagaaagaggagccaaagggcctaagggtgaaaacggtgtc
gttggtcccacaggccccgttggagctgctggcccatctggtccaaatggtccccctggt
cctgctggaagtcgtggtgatggaggcccccctggtatgactggtttccctggtgctgct
ggacggactggtcccccaggaccctctggtatttctggccctcctggtccccctggtcct
gctgggaaagaagggcttcgtggtcctcgtggtgaccaaggtccagttggccgaactgga
gaagtaggtgctgttggtccccctggctttgctggtgagaagggtccctctggagaggcc
ggtactgctggacctcctggcactccaggtcctcagggtcttcttggtgctcctggtatt
ctgggtctccctggctcaagaggtgaacgtggtctaccaggtgttgctggtgttgtgggt
gaacctggtcctcttggcattgccggccctcctggggcccgtggtcctcctggtgctgtg
ggtagtcctggagtcaatggtgctcctggtgaagctggtcgtgatggcaaccctgggaat
gatggtcccccaggtcgcgatggtcaacccggacacaagggagagcgtggttaccctggc
aacaatggtcccgttggtgctgcaggtgcacctggtcctcatggccccgtgggtcccgct
ggcaaacatggaaaccgtggtgaaactggtccttctggtcctgttggtcctgctggtgct
gttggtccaagaggtcctagtggcccactaggcattcgtggtgataagggagagcccggt
gataaggggcccagaggtcttcctggcttaaagggacacaatggattgcaaggtctgccc
ggtctcgctggtcaccatggtgatcaaggtgctcctggctccgtgggtcctgctggtcct
aggggccctgccggtccttctggccctgctggaaaagatggtcgcactggacatcctggt
acagttggacctgctggcattcgaggccctcagggtcaccaaggtcctgctggcccccct
ggtccccctggcccacctggacctccaggtgtaagtggtggtggttatgactttggttac
gatggagacttctacagggctgaccagcctcgctcagcaccttctctcagacccaaggat
tatgaagttgatgctactctgaagtctctcaacaaccagattgagacccttcttactcct
gaaggctctagaaagaacccagctcgcacatgccgtgacttgagactcagccacccagag
tggagcagcggttactactggattgaccctaaccaaggatgcactatggatgctatcaaa
gtatactgtgatttctctactggcgaaacctgtatccgggcccaacctgaaaacatccca
gccaagaactggtataggagctctaaggacaagaaacacgtctggctaggagaaactatc
aatgctggcagccagtttgaatacaatgtagaaggagtgacttccaaggaaatggctacc
caacttgccttcatgcgcttgctggccaactatgcctctcagaacatcacctaccactgc
aagaacagcattgcatacatggatgaggagactggcaacctgaaaaaggctgtcattcta
cagggctctaatgatgttgaacttgttgctgagggcaacagcaggttcacttacactgtt
ctcgtagatggctgctctaaaaagacaaatgaatggggaaagacaatcattgaatacaaa
acaaataagccatctcgcctgcccttccttgatattgcacctttggacatcggtggtgcc
aaccaggaattctttgtggacattggcccagtctgtttcaaataa
DBGET
integrated database retrieval system
