Macaca thibetana thibetana (Pere David's macaque): 126951502
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Entry
126951502 CDS
T08579
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126951502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mthb04147
]
126951502
00535 Proteoglycans [BR:
mthb00535
]
126951502
00536 Glycosaminoglycan binding proteins [BR:
mthb00536
]
126951502
Exosome [BR:
mthb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
126951502
Proteoglycans [BR:
mthb00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
126951502
Glycosaminoglycan binding proteins [BR:
mthb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126951502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Laminin_G_3
DUF1970
Motif
Other DBs
NCBI-GeneID:
126951502
NCBI-ProteinID:
XP_050641615
LinkDB
All DBs
Position
3:complement(151604887..151663854)
Genome browser
AA seq
1519 aa
AA seq
DB search
MAPDPSGCRVLLLLFCCLAAAQADLLNLNWLWFNNKDTSQAATTIPEPQGLLPVQPTADT
TTHVVPQDGSTEPATAPGSPEPPSELLEDSQGTPTSAVSPDMPEENIAGVGAKILNVAQG
IRSFVQLWNDTVPTESLARAETRVVEAPVGTLALPGPSSTPQENGTTLWPSSGAPSSPGT
HTTEAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSERVGEEVGLLQLLGDPPPQQITQTD
DPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIQPATEGPGVLFAITDSAQAVVS
LGVKLSGVRDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVEGGYVALYVDC
EEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGMIAELKVRGDPQVGPMHCLDEE
GDDSDGASGDFGSGLADTQELLREEMGTALKPRLPTPPPVTAPPLAGGSSTEDSRSEEIE
EQTTVTSLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGSPGPPGRAGPPGSP
CLPGPPGLPCPVSPLGPVGPALQPVPGPQGPPGLPGRDGTPGRDGEPGDPGEDGKPGDTG
PQGFPGTPGDVGPKGDKGDPGVGARGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDL
EALRGPRGFPGPPGPPGVPGLPGEPGRFGVNGSDVPGPAGLPGVPGREGPPGFPGLPGPP
GPPGKEGPPGRTGQKGSLGEAGAPGHKGSKGDPGPAGARGESGLAGAPGPAGPPGPPGPP
GPPGPGLPAGFDDMEGSGGPFWSTARGADGPQGPPGLPGLKGDPGVPGLQGAKGEVGANG
APGFPGLPGREGTAGPQGPKGDRGSQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDG
AVLSVPGPEGRPGFAGFPGPAGPKGDLGSKGERGSPGPKGEKGEPGSVFSPDGSALGPAQ
KGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDAHLGFGMRGMPG
PPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGTKGEVGPPGPPGQFPFD
FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPPGYPGIPGPKGESI
RGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGP
PGTMGTSSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVRNGFRKVQLEPRTPLP
RGTDNEVAALQPPVVQLHDSNPYPRREFPHPTARPWRADDILASPPRLPEPQPYPGAPHH
SSYVHLRPALPTSPPAHTHRDFQPVLHLVALNSPLPGGMRGIRGADFQCFQQARAVGLVG
TFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFAGSEGPLKPGARIFSFD
GKDVLRHPTWPQKSVWHGSDPSGRRLTESYCETWRTESPSVTGQASSLLGGRLLGQNAAS
CHHAYIVLCIENSFMTASK
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccccagcggctgccgcgtcctgctgctgctcttctgctgcctggcagct
gctcaggccgacctgctgaacctgaactggctttggttcaataataaggacaccagccaa
gcagctaccacgatccctgagccccaggggctcctgcctgtgcagcccacagcagacacc
accacgcacgtggtcccccaggatggttccacggagccagcgacagcccctggcagccct
gagccaccctcagagctgctggaggacagccagggcacccccacttctgccgtgagcccg
gacatgccagaggagaacattgccggtgtgggagccaagatcctgaacgtggcccaaggc
atccggagctttgtccagctgtggaatgacactgtccccactgagagcttggcccgggcg
gaaacgcgggttgtcgaggctcctgtgggcaccctcgccctccctgggccttccagcacc
ccccaggagaatgggaccactctgtggcccagcagtggcgctcccagctctccgggcacc
cacacgaccgaggctggcaccctgcctgcacccaccccatcgcctccctccctgggcagg
ccctgggcaccactcacggggccctcagtgccaccaccatcctcagagcgcgtcggcgag
gaggtggggctactgcagctccttggggaccctccaccccagcaaatcacccagacggat
gaccccgacgtcgggctggcctacgtctttgggccagatgccaacagcggccaagtggcc
cggtaccacttccccagcctcttcttccgcgacttctcgttgctgttccacatccagccg
gccacggagggcccaggggtgctgttcgccatcacagactcggcgcaggcagtggtctcg
ctgggcgtgaagctctctggggtgcgggacgggcaccaggacatctccctgctctacacg
gagccaggcgcaggccagacccacacagccgccagcttccggctccccgccttcgtcggc
cagtggacacacttagcgctcagtgtggagggtggctacgtggccctctacgtggactgt
gaggagttccagagaatgccgcttgctcggtcctcacggggtctggagctggagcccggc
gccgggctcttcgtggctcaggcaggaggagcggaccctgacaagttccaggggatgatc
gctgagctgaaggtgcgcggggacccccaggtgggccccatgcactgcctggacgaggaa
ggcgatgactcagatggggcatctggagactttggcagcgggctcgctgacacccaggag
cttctcagggaggagatgggcacagccctaaaaccgaggctccccacgccacccccggtc
actgctccacccttggctggaggcagcagcacggaagattccagaagtgaagaaatcgag
gagcagaccacagtgacttcattaggagctcagacacttcctggctcagattctgtctcc
acgtgggacgggagtgtccggacccctgggggccgcgtgaaagagggcggcctgaagggg
cagaaaggggagccaggtagtccaggcccgcctggccgggcaggccccccaggctccccc
tgcctgcctggtcccccgggtctcccgtgcccggtcagtcccctgggtcctgtaggccca
gccttgcaacctgtccccggaccgcaaggacctccagggctgccagggagggacggcacc
cctggaagggatggcgagccgggtgaccctggtgaagacggaaagccgggcgacaccggg
ccgcagggcttccccgggactccaggggacgtgggccccaagggtgacaagggagacccc
ggggttggagcgagaggacccccaggaccccaagggcctccggggcccccaggaccctcc
ttcagacacgacaagctgaccttcattgacatggagggatctggcttcggtggtgatctg
gaggccctgcggggtcctcgaggcttccccggaccccccggaccccccggtgtcccaggc
ctgcccggcgagccaggccgctttggggtgaacggttctgacgtcccaggacctgccggc
cttcctggtgtgcctgggcgcgagggtccccccgggtttcccggcctcccgggaccccca
ggccctccaggaaaagaggggcccccaggaaggacggggcagaaaggcagcctgggtgaa
gcaggcgccccaggacataaggggagcaagggagaccctggtcctgctggcgctcgcggg
gagagcggcctggcaggagcccctggacccgctggaccaccaggcccccctgggccccct
gggccaccaggaccaggactccccgctggatttgatgacatggaaggctccggggggccc
ttctggtcaacagcccgaggcgccgatgggccgcagggaccccctggcctgccaggactg
aagggggatcctggtgtgcctggcctgcagggagccaagggagaagttggagcaaacgga
gcccccgggttccccggcctccctggcagagagggcactgctgggccccaggggccgaaa
ggagacagaggcagccagggagaaaagggagatccagggaaggacggagtcgggcagcca
ggcctccccggaccccccggacccccggggcctgtggtctacgtgtcggagcaggatggt
gccgtcctgagcgtgccgggacctgagggccggccgggtttcgcaggctttcccggacct
gcaggacccaagggcgacctgggctctaagggtgaacgaggctccccgggacccaagggt
gagaagggtgaaccgggcagtgtcttcagccccgacggcagtgccctgggccctgcccag
aaaggagccaagggagagccgggcttccgaggacccccgggtccgtacggacggccgggg
cacaagggagagattggcttccctggacggccgggtcgccccgggatgaacggattaaaa
ggagagaaaggggagccgggagatgcccaccttggatttggcatgaggggaatgcccggc
cccccagggcctccagggcccccaggccctccagggactcctgtttacgacagcaatgtg
tttgctgagtccagccgccccgggcctccaggattgccagggaatcagggccctccagga
cccaagggcaccaaaggagaagtgggcccccccggaccaccagggcagtttccattcgac
ttccttcagttggaggctgaaatgaagggggagaagggagaccgaggtgatgcaggacag
aaaggcgaaaggggtgagcccgggggcggcggcttttttggctccagcctgccaggcccc
cccggtcccccaggcccacctggctaccctgggattccaggtcccaagggagagagcatc
cggggccagcctggcccacctggacctcagggaccccccggcatcggctacgaggggcgc
cagggccctcccggccccccaggcccccctggccccccagggcccccttcatttcccggc
cctcacaggcagactatcagcgttcccggccctccgggcccccctgggccccctgggcct
cctggaaccatgggcacctcctcaggggtgaggctctgggccacgcgccaggccatgctg
ggccaggtgcacgaggttcccgagggctggctcatcttcgtggccgagcaggaggagctc
tacgtccgtgtgcggaacgggttccggaaggtccagctggagccccggacgccacttcca
cgagggacggacaacgaagtggctgccttgcagccccctgtggtgcagctgcacgacagc
aacccctacccccggcgggagttcccccaccccaccgcaaggccctggcgggcagacgac
atcctggccagcccccctcgcctgcccgagccccagccctaccctggagccccgcaccac
agctcctacgtgcacctgcgtccggcgctccccacgagcccacccgcccacacccaccgc
gacttccagcccgtgctccacctggttgcgctcaacagcccgctgccaggcggcatgcgg
ggcatccgcggggccgacttccagtgcttccagcaggcacgggccgtggggctggtgggc
accttccgtgccttcctgtcctcacggctgcaggacctgtacagcatcgtgcgccgtgcc
gaccgcgcagccgtgcccatcgtcaacctcaaggatgagctgctgtttcccagctgggag
gctttgttcgcaggctctgagggtccgctgaagcccggggcacgcatcttctcctttgac
ggcaaggacgtcctgaggcaccccacctggccccagaagagcgtgtggcatggctcggac
cccagcgggcgcaggctgactgagagctactgcgagacgtggcggacagagtctccctcg
gtcacaggtcaggcctcctccctgctggggggcaggctcctagggcagaatgccgcaagc
tgccaccacgcctatatcgtcctctgcatcgagaacagcttcatgactgcctccaagtag
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integrated database retrieval system
