Macaca thibetana thibetana (Pere David's macaque): 126953705
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Entry
126953705 CDS
T08579
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04120
Ubiquitin mediated proteolysis
mthb04137
Mitophagy - animal
mthb04141
Protein processing in endoplasmic reticulum
mthb05012
Parkinson disease
mthb05014
Amyotrophic lateral sclerosis
mthb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126953705
04120 Ubiquitin mediated proteolysis
126953705
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126953705
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
126953705
05014 Amyotrophic lateral sclerosis
126953705
05022 Pathways of neurodegeneration - multiple diseases
126953705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mthb04131
]
126953705
04121 Ubiquitin system [BR:
mthb04121
]
126953705
03029 Mitochondrial biogenesis [BR:
mthb03029
]
126953705
Enzymes [BR:
mthb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
126953705
Membrane trafficking [BR:
mthb04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
126953705
Aggrephagy
Other aggrephagy associated proteins
126953705
Xenophagy
Other xenophagy associated proteins
126953705
Ubiquitin system [BR:
mthb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
126953705
Mitochondrial biogenesis [BR:
mthb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
126953705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
126953705
NCBI-ProteinID:
XP_050645254
LinkDB
All DBs
Position
4:complement(159441106..160824171)
Genome browser
AA seq
465 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPTDQLRVIFAGKELRNDWTVQNCD
LDQQSIVHIVQRPRRKGQEMNATGGDNARNTVGGCEREPQSLTRVDLSSSVLPGDSVGLA
VILHTDSRNDSPPAGSPADRPIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGP
SCWDDVLIPNRMSGECQSPHCPGTTAEFFFKCGAHPTSDKETSVALHLIATNSRNITCIT
CTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPESDQRKVTCEGGNGLGC
GFAFCRECKEAYHEGECSALFEASGTTTQAYRVDERAAEQARWEEASKETIKKTTKPCPR
CHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccgactgaccag
ttgcgtgtgattttcgcagggaaggagctgaggaatgactggactgtgcagaactgtgac
ctggatcagcagagcatcgttcacattgttcagagaccacggagaaaaggtcaagaaatg
aatgcaactggaggcgacaacgccagaaacacggtgggaggctgtgagcgggagccccag
agcttgactcgggtggacctcagcagctcagtcctcccaggagactctgtgggactggct
gtcattctgcacactgacagcaggaatgactcaccaccagctggcagtccagcagataga
ccaatctacaacagcttttatgtgtattgcaaaggcccctgtcaaagagtgcagccggga
aaactcagggtacagtgcagcacctgcagacaagcaacgctcaccttgacccagggtcca
tcgtgctgggatgatgttttaattccaaaccggatgagcggtgaatgccaatccccacac
tgccctgggactactgcagaatttttctttaaatgtggagcacaccccacctctgacaag
gaaacatcagtagctttgcacctgatcgcaacaaatagtcggaacatcacttgcattaca
tgcaccgacgtcaggagccccgtcctggttttccagtgcaactcccgccacgtgatttgc
ttagactgtttccacttatactgtgtgacaagactcaatgatcggcagtttgttcatgac
cctcaactgggctactccctgccttgtgtggctggctgtcccaactccttgattaaagag
ctccatcacttcaggattctgggagaagagcagtacaaccgataccagcagtatggtgca
gaggagtgtgtcctgcagatggggggcgtgttatgcccccgccctggctgtggagcgggg
ctgctgccggagtctgaccagaggaaagtcacctgtgaaggcggcaacggcctgggctgt
gggtttgccttctgccgggagtgtaaagaagcgtaccatgaaggggagtgcagtgcccta
tttgaagcctcaggaacaactactcaggcctacagagttgatgaaagagccgcagagcag
gctcgttgggaagaagcctccaaagaaaccatcaagaaaaccacgaagccctgtccccgc
tgccatgtaccagtggaaaaaaatggaggctgcatgcacatgaagtgtccgcagccccag
tgcaggctcgagtggtgctggaactgtggctgcgagtggaaccgcgtctgcatgggggac
cactggttcgacgtgtag
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