Macaca thibetana thibetana (Pere David's macaque): 126954347
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Entry
126954347 CDS
T08579
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126954347
09123 Folding, sorting and degradation
03018 RNA degradation
126954347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126954347
03041 Spliceosome [BR:
mthb03041
]
126954347
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126954347
mRNA cycle factors
Stress granule specific factors
126954347
Spliceosome [BR:
mthb03041
]
Complex C
Other components
Complex C specific factors
126954347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RRM_10
RRM_occluded
RBD_DEAH11
RBD_RDR6
RRM_MARF1
RRM_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
126954347
NCBI-ProteinID:
XP_050645879
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All DBs
Position
5:55416226..55421761
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AA seq
370 aa
AA seq
DB search
MSVAAKYRMASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQ
LTDAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSG
FGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREA
ELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNL
DDTIDDEKLRNEFSSFGSIIRVKVMQQEGQSKGFGFICFSSLEDATKAMIEMNGCFLGSK
PISIALAQSY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagcagccaagtaccgcatggcctccctgtatgtgggtgacttgcatgcagat
gtcaccgaggacctgctgttcaggaagttcagcgccgcggggcccgtgctgtccatccgc
atctgcagggaccaggtcacccgccgctctctgggctatgcctacgtgaacttcttgcag
ctgactgatgcccagaaggcgctggacacaatgaactttgacatcataaaaggcaaatcc
atccgtctcatgtggtctcagcgtgatgcctacttgaggagatctggaattgggaacgtg
ttcatcaagaatctggacaaatctatcgataacaaaaccctttatgaacatttttcaggt
tttggaaagattctttcctccaaggtgatgagtgatgatcaaggttccaagggctatgca
tttgtgcactttcagaaccagagtgctgcagacagggccattgaggagatgaatggaaaa
ctactcaagagctgcaaggtatttgttggcagattcaaaaaccgaaaagatcgtgaagct
gaactcagaagcaaagccagtgaattcaccaatatttacatcaaaaactttggaggcgac
atggatgatgagagattgaaggacgttttcagcaaatatggcaaaactctgagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagtttcgatagccat
gaggctgccaagaaagctgttgaagaaatgaatggaagggacataaatgggcagctgatt
tttgtaggccgggcacaaaagaaagtagagcgacaggctgagttaaagcaaatgtttgag
cagctgaaaagggaacgaattcgtgggtaccagggagtaaagctctatgttaagaacctt
gatgacaccattgatgatgaaaaactacgaaacgaattttcttcatttggatcaattatt
agagttaaggtaatgcagcaagagggccagagcaaagggtttggcttcatctgcttctcc
tctctagaggatgctactaaagcaatgatagagatgaatggctgcttcttgggctccaaa
cctattagcattgccttggcccagagttattag
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