Macaca thibetana thibetana (Pere David's macaque): 126955590
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Entry
126955590 CDS
T08579
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126955590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mthb04990
]
126955590
Domain-containing proteins not elsewhere classified [BR:
mthb04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
126955590
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
126955590
NCBI-ProteinID:
XP_050648288
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All DBs
Position
5:complement(70332532..70507093)
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AA seq
1261 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGISEALISENENKNLEHLTHGGHVESTTLQI
RPATKTQCTQFFLTPVKTEVPLAEDQRSGPDCAGSLKEETGLSYQRAPQMPDSQRGRVTE
ELILREKIEAEQPGPVVELQLSLSQERHKGASGPVVALPGPEKSKSPDPDPNLSHDKIVH
INSIPTNQKADPFLRSSKIIQISSGRELRVIQESEAGDARLPRVEVILDCSDRQKTEGCR
LQAGKGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
ADEEEEGDKEDTCEVAFLGASESEVDEELLSDVDDNTQVVNFDWDSGLVNIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQKEEDKVGGTPSREQGAAQTDGLRTMTSYQRRE
EESVRTQSSVSKSYIEVSHGLGHVPQQNGFTGASETANIQRMAPMNRTAKPFPGSVNQPA
TPFSPTRNMTSPIADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQAAPWSQPAF
YDSSERIASRDERISVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
RGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGVAPTQPPAFPTSNPSKGTVVSSIKIAQPSYPPARPASSLTVAGPFKGPQAAVASQNY
TPKPTVSTAAVNAAQPGAVGPSNELPGMSGRGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAAQASKPGKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSVKVNSALAMKQALPPRPVNAASPTNVQ
ASSVYSVPAYTSPPSFFAEASSPVSASPVPVGVPTSPKQESASSSYFVAPRPKFSAKKSG
VTIQESGRSLSLPGRSVPPTISASPWVYQPTYSYSSKPTDGLEKANKRPTPWEAAAKSPL
GLVDDAFRPRNIQESIVANVISAARRKVLPGPPEDWNERLSYIPQSQKAYMGSCGRQEYN
VTANNNMSTNSQYGSQLPYAYYRQASRNDSTIMSMETRSDYCLPVADYNYNPHPRGWRRQ
T
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattttatctgcatttccatgactggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagaagcagcccttacaagttgcaaagattcgaaatcagagc
aaagcctccgggtctgggctctgtgagggagatgaagtggtttccatcaatggcaaccct
tgtgcagatctcacctaccctgaagtcatcaagctcatggaaagcataacagactctctc
caaatgctcatcaaaagaccatccagtggaataagtgaggctttgatatctgaaaatgaa
aacaaaaacctcgagcatctcacacatgggggtcatgtggaaagtaccaccctgcagatc
cgaccagccacaaagacccagtgcacacagttcttcctcacccctgtcaagactgaagtt
cccctagctgaggatcaaagaagtggtcccgattgtgcagggagcttgaaagaagaaaca
ggcctgagctaccagagggctccccaaatgcctgactcccaaagaggacgcgtgacagaa
gagctgatcttaagggagaagatagaagccgaacagcctggccctgtggttgagctgcaa
ctgtccctttcacaggagagacataagggcgctagtggccctgtagtggctctcccggga
cccgaaaaatctaagtctcctgacccagaccctaacctgtcacatgacaagattgtccac
ataaattcgatccccactaatcagaaagcagaccctttcctgaggtccagcaagataatc
cagatctccagtggcagagagttgagagtgatccaggaaagtgaagcaggagatgcgaga
ctgccccgggtggaagtgatcctcgactgctctgacaggcagaagacagaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgccgtctcatcagaaggcacagagcagggagaagatccacgc
tcggaaaaggatcacagcagacctcacaagcaccgagcgcggcatgcacggctcaggagg
agtgaaagcctgtcagaaaaacaagtgaaggaagcaaaatctaaatgcaaaagcattgcc
cttcttctaacagatgctcccaaccccaactccaagggggtgttgatgtttaagaagcga
cgtcggagggccaggaaatacaccctagttagctacggtactggcgagcttgaacgagag
gcggacgaggaggaagaaggtgataaggaggatacatgtgaagtagcatttcttggtgca
agcgaatcagaggtggatgaagagttattgtctgacgttgacgacaacacacaagttgtg
aactttgactgggattctggactggtgaacattgaaaagaaactgaacagaggggacaag
atggagatgttaccagacaccacaggcaagggagccctcatgtttgccaagaggagggag
agaatggatcagatcacagcccaaaaagaagaggacaaggtaggtggaacgccaagcaga
gaacaaggtgctgcccagacggatggcctgagaactatgacttcttaccaaagaagggag
gaagagtcggtgagaacgcagagctctgtgagcaaaagctacatcgaggtgagtcatggt
cttggccatgttcctcaacagaatggcttcactggggcatctgagacagcaaacatccag
aggatggcccccatgaatagaacggccaaacccttcccagggtctgtgaatcagccagcc
acccctttctcgccaacccgaaacatgacgagtcctattgctgactttcctgcacctcca
ccttactctgcagtcactccaccccctgacgccttctccagaggggtatcaagtccaatt
gctggcccagcacagccccctccatggccccaggctgccccctggtcccagccagccttt
tacgattcatctgagcgaatagcttcccgagatgagaggatctcagtgccagcaaaaaga
acaggaatattgcaggaggccaaaaggagaagcacgacaaaacccatgtttacttttaaa
gagcccaaagtaagcccaaatcctgaactcttgtcactgcttcaaaattcagaaggcaaa
cggggcactggagctggaggtgattccggaccggaagaagactacctcagcttgggggca
gaggcttgtaatttcatgcagagctcctctgccaaacaaaagacccctcctcctgttgct
ccaaaacctgctgtcaagtcctcatcctcccaaccagtaactccagtttccccagtctgg
tctccaggagtggctcccacccaacctcctgccttccccacatccaacccatcaaagggc
accgttgtctcctccatcaaaatagcccagccttcttaccctcctgcccggcctgcaagt
tctttgactgtggctggtcccttcaaaggaccacaagcagcagtagccagtcagaattac
acacccaaaccaacagtttccacagcagcagtcaatgctgctcagcctggtgcagtggga
ccatccaatgagcttccaggaatgagcgggagaggagctcagctctttgctaagaggcag
tcgagaatggagaagtatgtggtggattcagacacggtgcaggcccacgctgctcgagct
cagtctcccactccatctctcccggccagttggaagtactcctccaatgtccgagcacct
cctcctgtggcctataatcctatccactccccctcttacccactggctgctctcaagtct
cagccatcagccgcacaggcctccaaacccggcaagaaaaaggggaagaaaccccttaat
gcattagatgtcatgaagcaccaaccgtatcagctcaatgcatccttgtttactttccaa
cctccagatgcaaaggatggcctcccccaaaagtcatcagtcaaggtcaattcagccctg
gccatgaagcaagctcttcctccccggccagtgaatgctgcctcacctacgaatgtgcag
gcttcgtcagtgtactcggtaccagcctatacctctcctccttccttctttgcagaggcc
tcctcaccagtcagtgcatccccagtgcctgtgggcgttcccacctcgccaaagcaagaa
tcagcctcatcatcttattttgtggcaccaaggccaaagttctcagccaagaaaagtggt
gtcacaattcaggagagtgggcgctccctttctcttcccggaagatcagtcccacccacc
atttctgcatctccttgggtataccagcctacttatagttactctagcaaaccaactgat
ggactagagaaagcaaacaagagaccaactccttgggaagcagcagcaaaatctcctctc
ggtctagtggatgatgctttcaggcccagaaacatccaggaatccattgtggcaaatgtg
atctcagcagctcggaggaaggtgcttccagggcctccagaggattggaatgaaagattg
tcctatattcctcaaagccagaaggcctatatgggctcatgtggaaggcaagagtataat
gtcacagccaataataatatgtccaccaactcccaatatggttcacagttgccatatgca
tattataggcaggcttcaagaaatgattccacaatcatgtccatggaaaccaggtctgat
tactgtcttccagtagctgattacaactacaacccacatccaaggggatggagacgccaa
acctga
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