Macaca thibetana thibetana (Pere David's macaque): 126956216
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Entry
126956216 CDS
T08579
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mthb03041
]
126956216
Enzymes [BR:
mthb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126956216
Spliceosome [BR:
mthb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126956216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
Ank
AAA_22
ATPase
PhoH
AAA_16
AAA_7
UvrD-helicase
AAA_29
ABC_tran
T2SSE
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
126956216
NCBI-ProteinID:
XP_050648990
LinkDB
All DBs
Position
6:complement(67990674..68077499)
Genome browser
AA seq
1430 aa
AA seq
DB search
MSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGD
QREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLT
HNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVK
RGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIP
CRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL
MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF
GSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQEN
TFKPESQRQRTVPNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHK
DIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNG
WMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFD
DEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFM
LHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFV
TMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHT
KLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPH
LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMAL
LRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRD
VNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPA
NGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSF
RVDGIPNDSSDSEMEDKTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRA
PSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRK
SSADTEFSDECTTAERILMKSPSPALHPPQKYKDRGILHPKRGTEDRSDQSSVKSTDSSS
YPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEISQQKGIWSTTPSNERKL
NRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLP
FQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKNTTD
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccgcggcagccggctcctggcggtggcggaggcggt
ggcccctcgccgtgtggccctgggggcggcgggcgggccaaggggctgaaggacattcgc
attgatgaggaggtgaagatcgcagtcaatatcgcgctggagcgcttccgatacggggac
cagagagagatggaatttccttcttctttgaccagtactgaaagagcctttattcatcga
ctcagtcagtctcttggtttggtctctaaaagtaaaggaaagggagcaaatagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtacagaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
cgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaa
agaggagaatccgaatttgattcttttaggcagtctttaccagtgtttgagaaacaggaa
gaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtct
ggaaagaccacacagattcctcagttccttttagatgattgctttaaaaatggtatccct
tgccgtatattttgtactcaaccaagacgattggcagctattgctgtggctgaaagagtt
gccgcagagagaagggaaaggattggtcaaacaattggttatcagatccgattagaaagc
agggtttctccaaagacacttctgacattttgtactaatggggtattgcttcgtacattg
atggcaggagatagtacgttgtcgactgtgacacatgttatcgtggatgaagtgcatgaa
agggatcgatttagtgattttttacttacaaagttaagagatttgttgcaaaagcaccca
actttgaaactaattctttctagtgctgccttggatgtgaatctctttataagatatttt
ggaagttgtccagtgatatacatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagatattttaagaacaactggatatacaaacaaagaaatgttaaagtacaaaaaggaa
aaacagcaagaagagaaacaacaaaccacacttacagaatggtactcagctcaagaaaat
actttcaagcctgaatctcagaggcagagaactgttccaaatgtgactgacgagtatgac
ttattggatgatggtggtgacgctgtcttcagtcagctgactgaaaaagatgtgaattgc
cttgaaccatggttaataaaggaaatggatgcttgtctttctgatatatggctacataaa
gatattgatgcctttgctcaggtctttcatctcattttaactgaaaatgttagtgttgat
tacagacatagtgaaaccagtgcaacagctctgatggttgccgcaggacgtggctttgca
agtcaagtagaacagttaatcagtatgggagccaatgtccatagtaaagcatcaaatggc
tggatggcattggattgggctaaacactttgggcagactgaaattgtggatcttctagaa
tcttacagtgcttcactggaatttggaaatctggatgaaagttctctggttcaaacaaat
ggaagtgacctcagtgctgaagacagagagctcctgaaagcttatcatcatagtttcgat
gatgaaaaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgt
gatgctggtgcagtactaatttttctgcctggatatgatgaaattgttggactgagagat
cgcatcctgtttgatgacaagcggtttgctgacagtacacatagataccaagtttttatg
cttcattcaaacatgcaaacatctgatcaaaagaaagtgttaaaaaacccacctgcaggt
gttcgaaaaataatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgtt
gtctttgttattgattctggtaaggtgaaagagaaatcctttgatgctctgaattttgtt
acaatgttaaaaatggtatggatttccaaagctagtgccatacagcggaaaggcagggca
gggcgatgtagacctggaatttgttttcgtctgttcagtagactccgattccagaatatg
ttggaatttcagactccagaacttttgagaatgccattacaggaactttgcttacatacc
aagctgttagccccagttaattgtcccattgctgattttcttatgaaagctcctgaacct
ccaccagctttaattgtaaggaatgctgtacaaatgcttaagacaatagatgcaatggat
acatgggaagatctaactgaacttgggtatcatttggctgacttgccagtagaaccacat
cttggtaaaatggtcctgtgtgctgttgttttaaagtgtctggaccccatccttacaatt
gcttgtacactagcttatcgagatccttttgtgctacctactcaggcctctcaaaaacgt
gcagctatgctttgtaggaaacgttttactgcgggagctttcagtgaccatatggcactt
ctcagagcattccaggcctggcaaaaagcacgaagtgatgggtgggagcgagccttttgt
gaaaagaattttctttcacaggctactatggaaataatcataggcatgagaacgcagttg
cttggtcagcttagagcatcaggttttgttagagcacgaggtggtggtgacattcgagat
gttaacacaaactctgagaattgggctgtcgttaaagctgcattggtggcaggcatgtat
cctaatttagtccatgtggacagagagaatctagtgttgacagggccaaaggagaaaaaa
gtacgatttcatcctgcttcagttctcagtcagcctcaatataaaaagattcctccagcc
aatggccaagctgcagcaattaaggcactgcccacagattggcttatttatgatgaaatg
accagagcccatagaatagctaatattagatgttgttcagcagtgacacctgtcactata
ttggtattctgtggaccagctagattggcaagtaatgctcttcaggaaccttcgtccttt
agagtggatggcattcccaatgacagtagtgatagtgaaatggaggacaaaactacagct
aatttggcagccttgaaacttgatgagtggctcaatttcaaactagagccagaggcagct
agtttattgctgcagctcagacagaagtggcatagcttatttttacgccgaatgagagct
ccatctaaaccttggtctcaagttgatgaagctaccataagagcaattatagctgtttta
agcactgaagaacagtctgcaggtttacaacaaccatctgggattggtcaaaggccaagg
cctatgtcttcagaagagcttcctttggcctcttcttggaggtcaaataatagtaggaaa
agttcagcagatactgaattttctgatgagtgtactactgcagaaagaatactgatgaaa
tctccatctccagcattacacccacctcagaagtacaaagatagaggaattttacatcct
aaacgaggcaccgaggaccgatccgatcagtcttctgtgaaatctacagacagcagtagt
tacccaagtccttgtgctagtccttctcctccatcctcaggaaagggatcaaaatctcct
tcaccaagaccaaacatgcctgttcgatacttcataatgaagagtagcaatttgagaaac
cttgaaatttctcaacagaagggtatctggtctacaactcctagtaacgaacggaagcta
aatcgagccttttgggaaagcagcatggtttacttggtattttctgttcaaggatctgga
catttccagggattttctaggatgtcttctgagattggaagggaaaagagccaggactgg
ggctctgcgggactaggaggagtatttaaagtggagtggatacgaaaagaaagccttccc
tttcaatttgcacaccatttactcaatccatggaatgacaacaagaaagtgcagataagc
agggatgggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgt
cttcccttgggagaaaaaaacacaactgattga
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