Macaca thibetana thibetana (Pere David's macaque): 126957238
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Entry
126957238 CDS
T08579
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
126957238
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mthb01009
]
126957238
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mthb04515
]
126957238
Protein phosphatases and associated proteins [BR:
mthb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126957238
Cell adhesion molecules [BR:
mthb04515
]
Cadherins
Protocadherins
126957238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
126957238
NCBI-ProteinID:
XP_050650834
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Position
6:39851593..39883128
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AA seq
1237 aa
AA seq
DB search
MDSGAGDRRCPEAALLILGPARMGPLRHSPGPGGQRLLLPSMLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPEN
TNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDR
ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVRDYTIEIVAVD
SGNPPLSSTNSLKVQVVDINDNAPVFTQSVTEVAFPENNKPGEVIAEVTASDADSGSNAE
LVYSLEPEPAAKGLFNISPETGEIQVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN
TSHRLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggggcgggcgaccggcgctgcccggaggcggccctcctgattctggggcct
gccaggatggggccgctgaggcacagcccaggccctggggggcaacggctactgctgccc
tccatgctgctagcactgctgctcctgctggctccatccccaggccacgccactcgggta
gtgtacaaggtgccggaggaacagccacccaacaccctcattgggagcctcgcagccgac
tatggttttccagatgtggggcacctgtacaagctagaggtgggtgccccgtaccttcgc
gtggatggcaagacaggtgacattttcaccactgagacctccatcgaccgtgaggggctc
cgtgaatgccagaaccagctccctggtgatccctgcatcctggagtttgaggtgtctatc
acagacctcgtgcagaatggcagcccccggctgctagagggccagatagaagtacaagac
atcaatgacaacacacccaacttcgcctcaccagtcatcactctggccatccctgagaac
accaacatcggctcactcttccccatcccgctggcttcagaccgtgatgctggtcccaac
ggtgtggcatcctatgagctgcaggctgggcctgaggcccaggagctatttgggctgcag
gtggcagaggaccaggaggagaagcaaccacaactcattgtgatgggcaacctggaccgt
gagcgctgggactcctacgacctcaccattaaagtgcaggatggcggcagccccccacgc
gccagcagtgccctgctgcgtgtcaccgtgctcgacaccaatgacaacgcccccaagttt
gagcggccctcctatgaggccgaactatctgagaatagccccataggccactcggtcatc
caggtgaaggccaatgactcagaccaaggtgccaatgcagagattgaatacacattccac
caggcacccgaagttgtgaggcgtcttcttcgactggacaggaacactggacttatcact
gttcagggcccggtggatcgtgaggacttaagcaccttgcgcttctcagtgcttgctaag
gaccgaggcaccaaccccaagagtgctcgtgcccaagtggttgtgactgtgaaggacatg
aatgacaacgcccccaccattgagatccggggcatagggctagtgactcatcaagatggg
atggctaacatctcagaggatgtggcagaggagacagctgtggccctggtgcaggtatct
gaccgagatgagggagagaatgcagctgtcacctgtgtggtggcaggtgatgtgcccttc
cagctgcgccaggccagtgagacaggcagtgacagcaagaagaagtatttcctgcagact
accaccccgctggactacgagaaggtcagagactacaccattgagattgtggctgtggac
tctggcaaccccccactctccagcaccaactccctcaaggtgcaggtggtggacatcaat
gacaacgcacctgtcttcactcagagtgttactgaggtcgccttcccggaaaacaacaag
cctggtgaagtgattgctgaggtcaccgccagtgatgctgactctggctctaatgctgag
ctggtttactctttggagcctgagccggctgctaagggcctcttcaacatctctcccgag
actggagagatccaggtgaagacatccctggatcgggaacagagggacagctatgagttg
aaggtggtggcagctgaccggggcagccctagcctccagggcacagccactgtccttgtc
aatgtgctggactgcaatgacaatgaccccaaatttatgctgagtggctataacttctca
gtgatggagaacatgccagcgctgagtccggtgggcatggtgactgtcattgatggagac
aagggggagaatgcccgggtgcagctctcagtggagcaggataatggtgactttgttatc
cagaatggcacaggcactatcctctccagcctgagcttcgatcgagagcaacaaagcacc
tacaccttccagctgaaggcggtggatggtggcgtcccacctcgctcagcttatgttggc
gtcaccatcaatgtgctggatgagaatgacaacgcaccctatatcactgccccttctaac
acctctcaccggctgctgaccccccagacacgtcttggtgagacggtcagccaggtggca
gctgaggactttgactctggtgtcaatgctgagctgatctacagcatcgcaggtggcaac
ccttacggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagatt
gagcggcgccaccatgggctacatcgcctggtggtgaaggtcagtgaccgcggcaagccc
ccacgctatggcacagccttggtccacctttatgtcaatgagactctggccaaccgcacg
ctgctggagaccctcctgggccacagcctggacacaccgctggatattgacattgctggg
gatccagaatacgagcgttccaagcagcgtggcaacattctctttggtgtggtggccggt
gtggtggccgtggccttgctcattgccctggcggttcttgtgcgctactgccggcagcgg
gaggctaaaagtggttaccaggctggtaagaaggagaccaaggacctgtacgcccccaag
cccagtggcaaggcctccaagggaaacaaaagcaagggcaagaagagcaagtccccaaag
cctgtgaagccagtggaggacgaggatgaggccgggctgcagaagtccctcaagttcaac
ctgatgagtgatgcccctggggacagtccccgcatccacctgcccctcaactacccacca
ggcagccctgacctgggccgccattaccgctctaactccccactgccttccatccagctg
cagccccagtcaccctcggcctccaagaagcaccaggtggtacaggacttgccacctgca
aacacattcgtgggcaccggggataccacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcacc
ttctcggccaccagccaggcccaggagctgcaggacccatcccagcacagttactatgac
agtggcctggaggagtctgagacaccgtccagcaagtcatcctcagggcctcgactcggt
cccctggccctgcctgaggatcactatgagcgcaccacccctgacggcagcataggagag
atggagcaccccgagaatgaccttcgccctttgcctgatgtcgccatgacaggcacatgt
acccgggagtgcagtgagtttggccactctgacacatgctggatgcctggccagtcatct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcgggtgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cccgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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