Macaca thibetana thibetana (Pere David's macaque): 126959646
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Entry
126959646 CDS
T08579
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126959646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126959646
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126959646
U7-dependent histone pre-mRNA processing factors
126959646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
126959646
NCBI-ProteinID:
XP_050655009
LinkDB
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Position
7:complement(15456265..15499034)
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctattatcaagttaactaccctttctggggtccaagaagaatctgccctttgc
tatcttctccaagttgatgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcacgttcaccagattgatgcagtactgttg
tctcaccctgatcctctccaccttggtgccctcccatatgctgtcggaaagttgggtctg
aactgtgctatctatgcaaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttatcagtctcgacacaatacagaagattttacactctttacattagatgatgtggat
gcagcctttgataaaatacagcagctaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcctgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcaggccttccttacttatcaca
gattcattcaatgctacatatgtacagcctagaagaaaacagagagatgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtgttaatagcagtggacacagca
ggcagagttttggaacttgctcaacttcttgatcagatttggaggactaaagatgcagga
ctgggtgtttactcattggcactcctaaataatgtcagttacaatgtggtagagttttct
aaatcccaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgccatctctctttatgtcatggtctttctgacttggcccgagta
cctagccctaaagttgtacttgccagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgtcaggatcctaagaactcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaagcttgaagggaaagaacttgaggaatacttggaaaaagagaaa
ctaaagaaagaagctgccaaaaagcttgagcagtcaaaagaggcagatatagattccagt
gatgagagtgacattgaggaagatattgaccagccatcagctcataagacgaagcatgac
ttgatgatgaaaggtgaaggcagtcgtaaaggaagttttttcaaacaggcaaaaaagtcc
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagagattatc
aaaccagaggatttcttggtgccagagcttcaagctactgaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aaatgtatttctacaacagagtctattgaaataaaagcccgggttacctacatagactat
gaaggacgctctgatggggattccattaaaaaaatcattaatcagatgaaaccacgacag
ttgatcatcgtccatggcccaccagaggccagtcaggatctggcagagtgctgtcgcgcc
tttggtgggaaagatattaaagtgtacatgccaaagctgcatgaaacagttgatgccacg
agtgaaactcacatctaccaggtgagattaaaagactcacttgtcagctctcttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttagatatgagagtttcc
aaagtggacacaggggttattttagaagaaggagaactaaaggatgatggagaagactca
gagatgcaagtggacgctccctcagattctagtgttatagcacaacaaaaggccatgaaa
agtctgttcggagatgatgaaaaagaaacaggtgaagaaagtgaaatcattcctactttg
gaacccttgccacctcatgaggttcctggacatcagtcagtttttatgaatgaaccaaga
ctgtcagacttcaagcaagttctcttacgggaggggattcaagctgaatttgtaggaggt
gtacttgtttgcaacaatcaagtagcagtccgcagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacaatatgcc
attgtgtaa
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