Macaca thibetana thibetana (Pere David's macaque): 126960880
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Entry
126960880 CDS
T08579
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
mthb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126960880
09123 Folding, sorting and degradation
03018 RNA degradation
126960880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126960880
03041 Spliceosome [BR:
mthb03041
]
126960880
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
126960880
mRNA cycle factors
Stress granule specific factors
126960880
Spliceosome [BR:
mthb03041
]
Complex C
Other components
Complex C specific factors
126960880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RRM_10
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
126960880
NCBI-ProteinID:
XP_050656648
LinkDB
All DBs
Position
8:44442596..44460901
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AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggacctccacccc
gacgtgaccgaggcgatgctctacgagaagttcagcccggccgggcccatcctctccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccggcggacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaaa
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtaggcaac
atattcattaaaaatctggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggttccaagggctat
ggatttgtacactttgagacgcaggaagcagctgaacgagctattgaaaaaatgaatgga
atgctcctaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaagaacgagaa
gctgaacttggagctagggcaaaagaattcaccaatgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttgggcctgccttaagtgtg
aaagtaatgactgatgaaagtggaaaatccaaaggatttggatttgtaagctttgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagctcaatggaaaacaa
atttacgttggtcgagctcagaaaaaggtggaacggcagacggaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaatctttatgtgaaaaat
cttgatgatggtattgatgatgaacgtctccggaaagagttttctccatttggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacagaaatgaacggtagaattgtggccaca
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaac
cagtatatgcagagaatggcaagtgtacgagctgtgcccaaccctgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagctgctcctaga
ccaccatttagtactatgagaccagcttcttcacaggttccacgagtcatgtcaacacag
cgtgttgctaacacatcaacacagacaatgggtccacgtcctgcagctgcagctgctgca
gctactcctgctgtccgcaccgttccacagtataaatatgctgcaggagttcgcaatcct
cagcaacatcttaatgcacagccacaagttacaatgcaacagcctgctgttcatgtacaa
ggtcaggaacctttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctgtttcctcttattcaagccatgcaccctactcttgctggtaaa
atcactggcatgttgttggagattgataattcagaacttcttcatatgctcgagtctcct
gagtcactccgttctaaggttgatgaagctgtagctgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagttaacagtgccaccggtgttccaactgtttaa
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