Macaca thibetana thibetana (Pere David's macaque): 126960937
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Entry
126960937 CDS
T08579
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 1 isoform X1
KO
K14401
cleavage and polyadenylation specificity factor subunit 1
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126960937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mthb03021
]
126960937
03019 Messenger RNA biogenesis [BR:
mthb03019
]
126960937
Transcription machinery [BR:
mthb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126960937
Messenger RNA biogenesis [BR:
mthb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126960937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
UspB
Motif
Other DBs
NCBI-GeneID:
126960937
NCBI-ProteinID:
XP_050656785
LinkDB
All DBs
Position
8:723607..740498
Genome browser
AA seq
1467 aa
AA seq
DB search
MYAVYKQAHPPTGLEFAMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGK
AHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSL
HYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEG
QRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSI
VAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGEYPGSGWGCVEGALSLPTSLCPPP
GGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKM
VISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLK
YTEKLQEPPASAVREAADKEEPPSKKKRVDATASWSAGGKSVPQDEVDEIEVYGSEAQSG
TQLATYSFEVCDSILNIGPCANAAMGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVL
QKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEARSPEADDDGRRHGFLI
LSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLH
FIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVI
TLCLYRDLSGMFTTESRLGGARDELGGRIGSEAEGLGSETSPTVDDEEEMLYGDSGSLFS
PSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQR
VLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEA
FPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGTEEGAGARGRVARFRYFED
IYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGEL
RISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTNTPCARIPRMTGEEKE
FETIERDERYIHPQQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSG
LKGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALC
HCNGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRY
QEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRL
LRRADFHVGAHVNTFWRTPCRGATEGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTY
RRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERS
ELAKKIGTTPDIILDDLLETDRVTAHF
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgtgtacaaacaggcgcatccgcccaccggcctggagttcgccatgtactgc
aacttcttcaacaacagcgagcgcaacctcgtggtggccgggacctcgcagctctacgtg
taccgcctcaaccgcgacgccgaggctctgaccaagaatgacaggagcacagaggggaag
gcccaccgggagaagctcgagctcgctgcctccttctctttctttggcaacgtcatgtcc
atggccagcgtgcagctggcaggagccaagcgggatgccctgctcctaagcttcaaggat
gccaagctgtctgtggtggaatacgacccgggcacccatgacctgaagaccctgtcgctg
cactactttgaggagcctgagcttcgggacgggtttgtgcagaacgtacacacgccgcga
gtgcgggtggaccccgatgggcgctgcgcagccatgcttgtctacggcacgcgactggtg
gtcctgcccttccgcagggagagcctggccgaggagcacgaggggctcgtgggtgagggg
cagaggtccagcttcctgcccagctacatcatcgatgtccgggccctagacgagaagctg
ctcaacatcatcgacctacagttcttgcatggctattatgagcccaccctgctcatcctg
ttcgagcccaaccagacctggcctgggcgcgtggctgtgcggcaggatacgtgctccatc
gtggccatctcactgaacatcacgcagaaggtgcaccccgtcatctggtccctcaccagc
ctgccctttgactgcacccaggctctggctgtgcccaagcccataggtgagtatcctggg
agtggatgggggtgtgtggagggagcgctgagcctgcccaccagcctgtgtccacctcca
ggtggggtggtggtctttgccgtcaactctctgctgtacctgaaccagagcgttccccca
tacggtgtggctctcaacagcctcaccacaggcaccacagctttcccgctacgcacccag
gagggtgtgcgaatcaccctggactgcgcgcaggccaccttcatctcctacgacaagatg
gtcatctccctcaagggcggcgagatctacgtgctgaccctcatcaccgacggcatgcgc
agcgtccgagcattccactttgacaaggcggccgccagcgtcctcaccaccagcatggtc
accatggagcccgggtacctgttcctgggttctcgcctgggcaactccctcctcctcaag
tacacagagaagctgcaggagcccccggccagtgctgtccgtgaggctgctgacaaggaa
gagcctccctcaaagaagaagcgagtggacgcgacggccagctggtcagctgggggtaaa
tcggtgccgcaggatgaggtggacgagattgaagtgtacggcagcgaggcccagtcaggc
acacagctggccacctactcctttgaggtgtgtgacagcatcctcaacatcggaccgtgc
gccaacgctgccatgggcgagcctgccttcctctctgaagagtttcagaacagtcctgag
ccggacctggagatcgtggtttgctctggccacgggaagaacggggctttgtcagtgctg
cagaagagcatccggccccaggtggtgacaacctttgagcttcccggctgctacgacatg
tggacagtcattgccccagtgcgtaaggaagaggaggacaatcccaagggggagggcaca
gagcaggaagccaggagcccggaagcagacgatgacggccgtagacatggattcctgatt
ctgagccgggaagactcaaccatgattctgcagacgggtcaggagatcatggagctggac
accagtggctttgccacgcagggccccacggtctttgctgggaacatcggggacaaccgc
tacattgtccaagtgtcaccgctgggcatccgcctgctggaaggagtgaatcagctgcac
ttcatccctgtggacctgggcgcccccatcgtgcagtgcgctgtggccgacccctatgtg
gtcatcatgagtgccgagggccacgtcaccatgttcctgctgaagagtgactcctacggt
ggccgccaccaccgcctggcgctgcacaagcctcccttgcaccatcagtccaaggtcatc
acgctgtgcctgtaccgagacctcagcggcatgttcaccactgagagccgcctgggcggg
gcccgtgatgagctgggaggccgcattggctcggaggccgagggcctgggctcggagact
agccccaccgtggatgacgaggaggagatgctgtatggggattcaggctccctcttcagc
cccagcaaggaggaggcccgaagaagcagccaaccccctgctgaccgggaccctgcaccc
ttccgggcagagcccacccactggtgcctgctggtgcgggagaatggcaccatggagatc
taccagctccccgactggcggctggtgttcctggtgaagaacttccctgtggggcagcgg
gtcctcgtggacagctcctttggacagcccactacacagggcgaggcccgcagggaggag
gccacacgccagggggagctgcccctcgtcaaggaggtgctgctggtggcactgggcagc
cgccagagcaggccctacctgctggtgcatgtggaccaggagctgctcatctacgaggcc
tttccccacgactctcagctcggccagggcaatctcaaagtccgctttaagaaggtccct
cacaatatcaacttccgtgagaagaagccaaagccatccaagaagaaagcagaaggtggc
ggcacggaggagggggccggggcccggggccgcgtggcgcgtttccgctacttcgaggat
atttatggctattcaggggtgttcatctgcggcccctcccctcactggctgctggtgact
ggccgaggggctctgcggctgcaccccatggccatcgatggccccgtcgactctttcgct
ccattccacaatgtcaactgtccccgcggcttcctgtacttcaacagacagggcgagctg
aggatcagtgtcctgcctgcctatctgtcctatgacgccccatggcctgtcaggaagatc
ccgctgcgctgcacggcccactatgtggcttaccacgtggagtccaaggtgtatgctgta
gccaccagcaccaacacgccgtgtgcccgcatcccacgcatgactggcgaggagaaggag
tttgagaccatcgagagagatgagcggtacatccacccccagcaggaggccttctccatc
cagctcatctccccagtcagctgggaggctattcccaatgccaggatcgagctgcaggag
tgggagcacgtgacctgcatgaagacagtgtcgctgcgcagcgaggagactgtgtcaggc
ctcaaaggctacgtggccgccgggacctgcctcatgcagggggaggaggtcacgtgccga
ggacggatcttgatcatggatgtgattgaggtggtacctgagcccggccagcccttgacc
aagaacaagttcaaagtcctttacgagaaggagcagaaggggcctgtgactgccctttgc
cactgcaacggccacctggtgtccgccatcggccagaagattttcctgtggagcctgcgg
gccagtgagctgacaggcatggccttcatcgacacgcagctgtacatccaccagatgatc
agcgtcaagaacttcatcttggcagccgacgtcatgaagagcatctcgctgctgcgctac
caggaggagagcaagacactgagcctggtgtcgcgggatgccaagcccctggaggtgtac
agcgtggacttcatggtggacaacgcccagctgggttttctggtgtctgaccgtgaccgc
aacctcatggtgtacatgtacctgcccgaagccaaggagagttttgggggcatgcgccta
ctgcgcagggcggacttccacgtgggtgcccacgtgaacacgttctggaggaccccatgc
cggggggccaccgaagggctcagcaaaaagtcggtcgtgtgggagaataagcacatcacg
tggtttgccaccctggacggtggtatcgggctgctgctgcccatgcaggagaagacctac
cggcggctgctgatgctgcagaacgcgctgaccaccatgcttccgcaccacgccggcctc
aacccccgtgccttccggatgctgcacgtggaccgccgcaccctccagaatgctgtgcgc
aacgtgctggatggcgagctgctcaaccgctacctgtacctgagcaccatggagcgcagc
gagctagcgaagaagatcggcaccacgcccgacataatcctggacgacttgctggagacg
gaccgcgtcaccgcccacttctag
DBGET
integrated database retrieval system
