Macaca thibetana thibetana (Pere David's macaque): 126961477
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Entry
126961477 CDS
T08579
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
126961477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mthb04040
]
126961477
Ion channels [BR:
mthb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126961477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
Acetate_kinase
DUF7694
Motif
Other DBs
NCBI-GeneID:
126961477
NCBI-ProteinID:
XP_050657875
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All DBs
Position
8:72707957..72762275
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AA seq
1119 aa
AA seq
DB search
MKRSLRKMWRPGEKKESQGVVYEDVQDDTDDCKETLKVVFEGSAYGLQNYNKQKKLKRCD
DMDTFFLHYAAAEGQIELMEKITRDSSLEVLNEMDDYGNTPLHCAVEKNQIESVKFLLSR
GANPNLRNFNMMAPLHLAVQGTHNEVMKVLLEHRTIDINLEGENGNTAVIIACTTNNSEA
LQILLNKGAKPCKSNKWGCFPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFVNNGKA
SPLHLAVQNGDLEMIKMCLDNGAQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVD
IVNTTDGSHETMLHRASLFDHHELADYLISVGADINKIDSEGRSPLILATASASWNIVNL
LLSKGAQVDIKDNFGRNFLHLTVQQPYGLKNLRPEFMQMQQIKELVMDEDNDGCTPLHYA
CRQGGPDSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDL
HGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKC
TDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASFLHLALHNKRKEVVLTII
RSKRWDECLKVFSHNSPGNKCPITEMIEYLPECMKVLLDFCMLHSTEDKSCRDYYIEYNF
KYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVCKEYLLMKWLAYGFRAHM
MNLGSYCLGLIPMTILVVNIKPGMAFNSTGIINETSDHSEILDTTNSYLIKTCMILVFLS
SIFGYCKEAGQIFQQKRNYFMDMNNVLEWIIYTTGIIFVLPLFVEIPAHLQWQCGAIAVY
LYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNLQDPFSS
PLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPFLSFAQLICFAIFVPIVLMNLLIGLA
VGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSIIVYPNKPRCGGLLFHIF
YFLFCTGEIRQEIPNADTSLEMEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETED
EDNHCSFQDRFKKEQMEQRNSRWNTVLRAVKAKTHHLEP
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaggaagatgtggcgccctggagaaaagaaggagtcccagggtgtt
gtctatgaggatgtgcaggacgacaccgacgattgcaaggaaacgcttaaggtggttttt
gaaggaagtgcatatggattacaaaactataataaacaaaagaaattaaaaagatgtgat
gatatggacaccttcttcttgcattatgccgcagcagaaggccaaattgagctaatggag
aagatcaccagagattcctctttggaagtactgaatgaaatggatgattatggaaatacc
cctctgcattgtgctgtagaaaaaaaccaaattgaaagtgttaagtttcttctcagcaga
ggagcaaacccaaacctccgaaacttcaacatgatggcgcccctccacttagctgtgcag
ggcacgcacaacgaggtgatgaaggtcttgcttgaacacagaactattgatattaatttg
gaaggagaaaatggaaacacagctgtgatcattgcgtgcaccacaaataatagtgaagca
ctgcagattttgcttaacaaaggagctaagccatgtaaatcaaataaatggggatgtttc
cctattcaccaagctgcattttcaggttccaaagaatgcatggaaataatactaaggttt
ggtgaagagcatgggtacagtagacagttgcacattaactttgtgaataatgggaaagcc
agccctctccacttggctgtgcaaaatggtgacttggaaatgatcaaaatgtgcctggac
aatggcgcacaaatagacccagtggagaagggaaggtgcacagccattcattttgctgcc
acccagggagccactgagattgttaaattgatgatatcgtcctattctggtagcgtggat
attgttaacacaaccgatggaagtcatgagaccatgcttcacagagcttcattatttgat
caccatgaactagcagactatttaatttcagtgggagcagatattaataagatcgattct
gaaggacgctctccacttatattagcaactgcttctgcatcttggaatattgtaaatttg
ctactctctaaaggtgcccaagtagacataaaagataattttggacgtaattttctgcat
ttaactgtacagcaaccttatggattaaaaaatctgcgacctgaatttatgcagatgcaa
cagatcaaagagctggtaatggatgaagacaatgatgggtgtactcctctacattatgca
tgtagacaggggggccctgattctgtaaataaccttcttggctttaatgtgtccattcat
tccaaaagcaaagataagaaatcacctctgcattttgcagccagttacgggcgtatcaat
acctgtcagaggctcctacaagacataagtgatacgaggcttctgaatgaaggggacctt
catggaatgactcctctccatctggcagcaaagaatggacatgataaagtagttcagctt
cttctgaaaaaaggtgcattgtttctcagtgaccacaatggctggacggctttgcatcat
gcgtccatgggcgggtacactcagaccatgaaggtcattcttgatactaatttgaagtgc
acagatcgcctggatgaagacgggaacactgcacttcactttgctgcaagggaaggccac
gccaaagccgttgcgcttcttctgagccacaatgctgacatagtcctgaacaagcagcag
gcctcctttttgcaccttgcacttcacaataagaggaaggaggtggttcttacaatcatc
aggagcaaaagatgggatgaatgtcttaaggtttttagtcataattctccaggcaacaaa
tgtccaattacagaaatgatagaatacctccctgaatgcatgaaggtacttttagatttc
tgcatgttgcattctacagaagacaagtcctgccgagactactatatcgagtataatttc
aaatatcttcaatgcccgttagaattcaccaaaaaaacacctacacaggatgttatatat
gaacctctcacagccctcaatgcaatggtacaaaataaccgcatagagcttctcaatcat
cctgtgtgtaaagaatatttactcatgaaatggttggcttatggatttagagctcatatg
atgaatttaggatcttactgtcttggtctcatacctatgaccattctcgttgtcaatata
aaaccaggaatggctttcaactcaaccggaatcatcaatgaaactagtgatcattcagaa
atactagataccacgaattcatatctaataaaaacttgtatgattttagtgtttttatca
agtatatttgggtattgcaaagaagcggggcaaattttccaacagaaaaggaattatttt
atggatatgaacaatgttttggaatggattatctacacaacgggcatcatttttgtgctg
cccttgttcgttgaaataccagctcatctgcagtggcaatgtggagcaattgctgtttac
ctctattggatgaatttcttattgtatcttcaaagatttgaaaattgtggaatttttatt
gttatgttggaggtaattttgaaaactttattgaggtctacagttgtatttatcttcctt
cttctggcttttggactcagcttttacatcctcctgaatttacaggatcccttcagctct
ccattgctttctataatccagaccttcagcatgatgttaggagatatcaattatcgagag
tccttcctagaaccatatctgagaaatgaattggcacatccatttctgtcctttgcacaa
cttatttgcttcgcaatatttgtcccaattgtcctcatgaatttacttattggtttggca
gttggtgacattgctgaggtccagaaacatgcatcattgaagaggatagctatgcaggtg
gaacttcataccagcttagagaagaagctgccactttggtttctacgcaaagtggatcag
aaatccatcatcgtgtatcccaacaaacccagatgtggtgggctattattccatatattc
tattttttattttgcactggagaaataagacaagaaataccaaatgctgatacgtcttta
gaaatggaaatattaaagcagaaataccggctgaaggatcttacttttctcctggaaaaa
cagcatgagctcattaaactgatcattcagaagatggagatcatctctgagacagaggat
gaagataaccattgttcttttcaagacaggtttaagaaagagcagatggaacaaagaaat
agcagatggaatactgtgttgagagcagtcaaggcaaaaacacaccatcttgagccttag
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