Macaca thibetana thibetana (Pere David's macaque): 126961621
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Entry
126961621 CDS
T08579
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126961621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mthb00535
]
126961621
Proteoglycans [BR:
mthb00535
]
Extracellular matrix (ECM) proteoglycans
Others
126961621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Arylsulfotran_N
CBM_4_9
VWA_3
Motif
Other DBs
NCBI-GeneID:
126961621
NCBI-ProteinID:
XP_050658120
LinkDB
All DBs
Position
8:complement(24778484..25023891)
Genome browser
AA seq
1796 aa
AA seq
DB search
MKIFQCKMRYWLLPPFLAIVYFCTIVQGQVAPPTRLRYNVISHDSIQISWKAPRGKFGGY
KLLVTPASGGKTNQLNLQNTATKAIIQGLMPDQNYTVQIIAYNKDKESKPVQGQFRIKDL
EKRKDPKPRVKVVDRGNGSRPSSPEEVKFVCQTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVTAFDVGSEKTRIGLAQYSGDPRIEWHLNAFSTKDEVIEAVRNLPYKGGNTLTGLA
LNYIFENSFKPEAGSRTGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADVN
ELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDREIKASAHAITGPPTELI
TSEVTARSFMVNWTHAPGNVEKYRVVYYPTRGGKPDEVVVDGSVSSTVLKNLMSLTEYQI
AVFAIYAHTASEGLRGTETTLALPMASDLLLYDVTENSMRVKWDAVPGASGYLILYAPLT
EDLAGDEKEMKIGETHTDIELSGLLPNTEYTVTVYAMFGEEASDPVTGQETTLALSPPRN
LRISNIGSNSARLTWDPTSRQINGYRIVYNNADGTEINEVEVDPITTFPLKGLTPLTEYT
VAIFSIYDEGQSEPLTGVFTTEEVPAQQYLEIDEVTTDSFRVTWHPLSADEGLHKLMWIP
VYGGKTEEVVLREEQDSHVIEGLEPGTEYEVSLLAVLDDGSESEVVTAVGTTLDSFWTEP
ATTMVPTTPVTSVFQTGIRNLVVGDETTSSLRVKWDISDSDVQQFRVTYLTVQGDPEEEV
VGTIMVPGSQNNLLLKPLLPDTEYKVTVTPIYTDGEGVSVSAPGKTLPSSAPQNLRVSEE
WYNRLRITWDPPSSPVKGYRIVYKPVSVPGPTLETFVGADINTILITNLLSGMDYNVKIF
ASQASGFSDALTGMVKTLFLGVTNLQAKHVEMTSLCAHWQVHRHATAYRVVIESLQDTKK
QESTVGGGTTRHCFYGLQPDSEYKISVYTKLQEIEGPSVSIMEKTQSLPTQPPTFPPTIP
PAKEVCKAAKADLVFMVDGSWSIGDDNFNKIISFLYSTVGALNKIGTDGTQVAMVQFTDD
PRTEFKLNAYKTKETLLDAIKHISYKGGNTKTGKAIKYVRDSLFTAESGTRRGIPKVIVV
ITDGRSQDDVNKISRDMQLDGYSIFAIGVADADYSELVSIGSKPSARHVFFVDDFDAFKK
IEDELITFVCETASATCPMVHKDGIDLAGFKMMEMFGLVEKDFSSVKGVSMEPGTFNVFP
CYQLHKDALVSQPTRYMHPEGLPSDYTISFLFRILPDTPQEPFALWEILNKNSDPLVGVI
LDNGGKTLTYFNYDQSGDFQTVTFEGPEIRKIFYGSFHKLHIVVSDTLVKLVIDCKQVGE
KAINASANITSDGVEVLGKMVRSRGPDGNSAPFQLQMFDIVCSTSWANTDKCCELPGLRD
DESCPDLPHSCSCTETNEVALGPAGPPGGPGLRGPKGQQGEPGPKGPDGPRGEVGLPGPQ
GPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPGPQGIPGGVGSPGRDGSPGQRGLPGKDG
SSGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRSVA
RQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGSPGAPGEQGPPGTPGFP
GNAGVPGTPGERGLTGVKGEKGNPGVGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGP
PGHLGVPGPQGPSGQPGYCDPSSCSAYGVRAPHPDQPEFTPVQDELEAMELWGPGV
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcagtgcaagatgcggtactggttgcttccaccttttttggcaattgtt
tatttctgcaccatcgtccaaggtcaagtggctccacccacaaggttacgatataatgta
atatctcatgacagtatacagatttcatggaaggctccaagagggaaatttggtggttac
aaacttcttgtgactccagcttcaggtggaaaaactaaccagctgaatctccagaacact
gcaactaaagcaattattcaaggccttatgccagaccagaattacacagtccaaattatt
gcatacaataaagataaagaaagcaagccagttcaaggccaattcagaattaaagattta
gaaaaaagaaaggatccaaagcccagagtcaaagttgtggacagaggaaatgggagtaga
ccatcttcaccagaagaagtgaaatttgtctgtcaaactccagcgattgctgacattgta
atcctggtcgatggttcatggagtattggaagattcaacttcagactggttcgacttttc
ttggaaaacctggttacagcattcgatgtgggctcagagaagacacgaattggtcttgca
cagtatagtggcgaccccagaatagaatggcacttgaatgcatttagcacaaaagatgag
gtgattgaagctgtccgaaacctcccatataaaggaggaaatacactaacaggtcttgct
ttgaactacatttttgaaaatagcttcaaacctgaagcaggatcaaggaccggagtatcc
aaaatcggtattttaatcacagatggaaaatcccaggatgacattattccaccatctaga
aaccttcgtgagtctggtgtagaactgtttgccataggggtgaaaaacgcggatgtgaat
gagctgcaggagatcgcctctgaaccggacagcactcatgtgtacaatgttgccgaattc
gacctgatgcacacagttgtggagagtctgaccaggactgtctgctctagagtggaagaa
caggacagagaaattaaagcctcagcccatgccatcactgggccgcctacggagttgatt
acttctgaagtcactgccagaagctttatggttaactggactcatgccccaggaaatgtg
gaaaaatacagagttgtgtattatcctaccaggggtggaaaaccagacgaggtggtggta
gatggaagtgtatcttccacagtgttgaaaaacttgatgtctttaactgaatatcagata
gcagtctttgcaatctatgcccacactgctagtgaaggcctacggggaactgaaactaca
cttgctttacccatggcttctgaccttctactgtatgatgtgactgagaacagcatgcga
gtcaaatgggatgcagtacctggggcctcaggttacctgatcctttatgctcccctaaca
gaggacctggctggggatgaaaaagagatgaaaattggagagacccacacggatattgaa
ttgagtgggttgttgcccaatacagaatacacagtcacagtttatgccatgtttggagaa
gaggccagcgatcctgttacgggacaggaaacaacattggctttaagtccaccaagaaat
ctgagaatctccaatattggctctaacagtgctcgattaacctgggacccaacttcaaga
cagatcaatggttatcgaattgtatataacaatgcagatgggactgaaatcaatgaggtt
gaagttgatcctattactaccttccctctgaagggcttgacacctctcacagagtatact
gttgctattttctccatctatgatgaaggacagtcagagcctctaactggggtttttacc
accgaggaagttccagcccagcaatacttagaaattgatgaggtgacgacagacagtttt
agggtgacctggcatcccctctcagctgatgaagggctacacaaattgatgtggattcca
gtctatggggggaagaccgaggaggttgtcctgagagaagaacaggactcacatgttatt
gaaggcttggagcccggtacggagtatgaagtttcactattggccgtacttgatgatgga
agcgagagtgaggtggtgactgctgtggggaccacacttgacagtttttggacagaacca
gctacaaccatggtgcctaccacgcctgtgacgtcagttttccagacgggaatcagaaac
ctggttgtaggtgatgaaaccacttctagcctgcgggtaaaatgggacatttctgacagc
gatgtgcagcagtttagggtgacctacctgacagttcaaggggaccccgaggaagaagtg
gtaggaacgattatggtgcctggaagccagaacaatctccttctgaagcctctgcttcct
gatactgaatacaaagtcacagtgactcccatctacacagatggagaaggtgtcagtgtc
tctgctcctggaaaaaccttgccgtcctcagcgccccagaacttgcgggtgtccgaggaa
tggtataaccggttgcgcattacgtgggaccccccgtcttccccagtgaaaggctataga
attgtctacaaacctgtcagtgttcctggtccaacactggaaacatttgtgggagctgac
attaacaccattcttatcacaaacctcctcagtggaatggattacaatgtgaagatattt
gcctcccaggcctcaggcttcagcgacgccctgacaggcatggtgaaaacattgttcttg
ggtgttacaaatctccaagccaaacacgttgaaatgaccagcttgtgtgcccactggcag
gtacatcgccatgccacagcctatagggttgttatagaatccctccaggatacaaaaaag
caagaatcaactgtgggtggaggtacaaccaggcattgcttctatggacttcagcctgat
tctgaatataaaatcagtgtttatacaaagctccaggagattgaaggacctagtgtgagc
ataatggaaaaaacacaatcacttcctacacaaccaccaacttttccaccaaccattcca
ccagcaaaagaagtatgtaaggcggccaaggctgacctggtatttatggtggatggatcc
tggagcattggagatgacaatttcaataagatcatcagctttctgtatagcactgttgga
gccctgaacaagattggcacagatggaacccaagttgcaatggttcagttcactgatgac
cccagaacagaatttaaactaaatgcttacaaaaccaaagagactcttctggatgcaatt
aaacacatttcatacaaaggaggaaatacaaaaacaggaaaagcaattaagtatgttcga
gattccttgttcacagcagagtcaggtacaagaaggggcatcccaaaggttattgtggtt
ataactgatggaagatcacaagatgatgtgaacaaaatctccagggacatgcaattagat
ggctatagcatttttgcaattggtgtggccgatgcagattactcggagttggttagcatt
ggcagtaagcccagcgcacgccatgtcttctttgtggatgactttgacgcctttaagaaa
atcgaagacgagttaattacttttgtctgcgaaaccgcatcagcaacctgtccaatggta
cacaaggatggcattgatcttgcaggatttaaaatgatggaaatgtttggtttggttgaa
aaagatttttcatcagtgaaaggggtttctatggagcctggtactttcaatgtgtttcca
tgttaccaactccataaagatgccctggtttcccagccaaccaggtacatgcatccggaa
ggattgccctccgactacacaatcagttttctattccggattcttcctgatactccacag
gagccctttgctctttgggagattttaaataaaaattctgacccattggttggggttatt
ttagacaatggtgggaaaactctaacatatttcaactatgaccagagtggggattttcag
actgttactttcgaaggacctgaaattaggaaaattttttatggaagctttcacaagcta
cacattgttgtcagtgacactttggtcaaattggttattgactgcaagcaagtgggtgag
aaggcaataaatgcatcagctaatatcacatcagatggtgtagaagtactagggaaaatg
gttcgatcaagaggaccagatggaaactctgcaccgttccagttacagatgtttgatatt
gtttgttccacatcatgggccaatacagacaaatgctgtgaacttccaggcctgagagat
gatgagtcttgcccagaccttcctcattcttgctcctgtactgaaaccaatgaagtggct
ctgggaccagcaggcccaccaggtggtccgggactccgaggaccaaagggccaacaaggt
gaaccaggtccaaagggaccagatggccctcggggtgaagttggtctaccaggacctcag
ggtccacctggaccccaaggaccaagtggtctgtccattcaaggaatgcccggaatgcca
ggagaaaaaggagagaaaggagatactggccttccaggtccacagggtatcccaggaggc
gttggttcaccaggacgtgatggctcaccaggccagaggggccttccaggaaaggatgga
tcctcgggacctccaggaccaccagggccaataggcatccctggggcccctggagtccca
ggaatcacaggaagcatgggaccgcaaggcgccctgggaccacccggtgtccctggggca
aagggggaacgaggagagcggggtgacctgcagtctcaagccatggtgagatcagtggca
cgtcaagtatgcgaacagctcatccagagtcacatggccaggtacactgccatcctcaac
cagattcccagccactcctcatccatccggactgtccaagggcctcctggggagcctggg
agaccaggctcacctggagcccctggtgaacaaggacccccaggcacaccaggcttcccc
ggaaatgcaggcgtgccagggaccccaggagaacgaggtctaactggtgtcaagggagaa
aaaggaaatccaggcgttggaacccaaggtccaagaggcccccctggaccagcaggacct
tcaggagagagtcggcctggcagccctgggccccctggctctcctggaccaagaggcccc
ccaggtcatctgggggttcctggaccacaaggtccttctggccagcctggatattgtgac
ccctcatcatgttctgcctatggtgtgagagctccccatccagatcagccagagttcacc
cctgtccaagacgagctggaagccatggaactgtggggccccggagtctga
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integrated database retrieval system
