Macaca thibetana thibetana (Pere David's macaque): 126964091
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Entry
126964091 CDS
T08579
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
mthb
Macaca thibetana thibetana (Pere David's macaque)
Pathway
mthb04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mthb00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126964091
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
DUF4959
Motif
Other DBs
NCBI-GeneID:
126964091
NCBI-ProteinID:
XP_050662882
LinkDB
All DBs
Position
10:complement(36491592..36532713)
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AA seq
1568 aa
AA seq
DB search
MAWPLPLHSPSTMSSRAPAHLGLGLCLWLWLSTTLGREQGPASGHLRLTVLPEDRLQMKW
RESEGSGLGYLVQVQPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLL
ARREFVIEDLKSSSLDRNNQRPLSNGALEPTPSLMGSPDPEQASEPRVAFVPSRDPPIPA
SPQFRCLPPVPADMVFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGD
AQTEWNLNSFGTKEQVLAAVHRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVIL
VTDGKSQDNVHTAARVLKDLGVNIFAVGVKNADEAELRLLASPPRDITVHNVLDFPQLGA
LAGLLSRLICQRLQDGGPRRGPAAAPALDTLPAPTGLVLSQVTSSSIHVSWTPAPRLPLK
YLIVWRASRGGTPREVVVEGPAASAELHNLTSRTEYLVSVFPIYEGGVGEGLRGLVTTAP
LSPPRALTLATVTPRTIHLTWQPSAGATHYLVRCSPASSKGEEEEREVQVRRPEVLLDGL
EPGRDYEISVQSLRGPESSEARGIRARTPVLAPPRHLGFSDVSHDTVRVIWEGAPRPVRL
VRVTYVSSEGGHSGQTETPGNATSAVLGPLSSSTTYTVRVTCLYPGGGSSTLTGQVTTKK
VPSPSQLSVTELPGDTVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAVLPG
LGRHTEYDVTILAYYRDGARSDPVSLRYTPSTVNRSPPSNLALASETPDSLQVSWTPPRG
RVLHYRLTYTPASGSGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSAT
GQTACPALRPDSSLPGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRR
VSDVHPAPLPPEHTIVFLVRVLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHR
DPRAALQEATFDPQEVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSAPSAG
FITLGRLAKARGPRSSSAAFQLQTLQIVCSDTWADEDRCCELPASRDGETCPAFVSACSC
SSETPGPPGPQGPPGLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQGIPG
RVGLQGPKGMRGLEGTAGLPGPPGPRGFQGMAGARGTGGERGPPGAVGPTGLPGPKGERG
EKGEPQSLATLYQLVSQACESAIQTHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSPGT
RSKALLPGEWRHGSRHLEGRGEPGAVGQTGSPGQQGASTQGLWERQGGVLRAQGPAQADP
SENDPTHSPAHNPAHPRPCWTQRVETQALALSLCPTVFSLSDLSALLSCRDIFCTVPRNP
APSSMVCLDTKSDHILEKPGEKLRKHLQTRLTQGTDGSTAVPLVTCTVVPASEQHSHPDP
STFASGNRQGPACLIVPSVSSPRRSPDPVCLQAVPSDCLRPQEQPWKLQAFTVPPRATCK
EEEKGGEGLAWNRVVFQQQEEEKGEGLARNLEGQIPKVSLPLSATSPWPDVVPRPSGAAR
VEPFLDPP
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcctcttcccctccacagcccgagcaccatgagctcccgagcccctgcacac
ctcggcctcggcctctgcctctggctgtggctgagcaccactctgggaagagagcaagga
ccagcaagtggccacctgaggctgactgtgctgcctgaggaccggctacagatgaagtgg
agagagtcggaggggagcggcctcggctacctggtgcaggtgcagcccatggcaggggac
tcggaacaggaggtgatactgaccaccaagacccctaaggccacagtggggggcctgagc
ccctccaagggctacaccttgcagatcttcgagctcactggctctgggcgcttcctgctg
gctcggagggagtttgtgattgaggatctgaagagtagctccttggacaggaacaaccag
agacctctcagcaatggagccctggagcccaccccctccctcatggggagcccagaccct
gagcaggcttccgagccccgagttgcctttgtgccaagccgggatccgcccattcctgcc
agcccccagttccgctgcctaccccctgtgcctgctgacatggtcttcctggtggacggg
tcctggagcatcggccacagtcactttcagcaggtcaaggacttcctggccagcgtcatt
gcaccctttgaaatcgggccggataaggtccaagtaggcctgactcagtacagcggcgat
gcccagactgagtggaacctgaactccttcggcaccaaggagcaggtgctggcagctgtg
caccgcctccgctacaagggggggaacacgttcacaggcctcgccctgacccatgtgctg
gggcagaacctgcagccggcggccggcctccgtccagaggcggccaaggtggtgattctg
gtgacggacggcaagtcccaggacaatgtgcacactgctgctcgtgtcctcaaggacctg
ggcgtgaacatcttcgctgtgggtgtgaagaatgccgatgaggctgagctgaggctcctg
gcgtccccgccgcgggacatcaccgtccacaacgtgctggacttcccgcagcttggcgca
ctggctggcctgctcagccgcctcatctgccagaggctgcaggatgggggcccgcggcgg
ggcccagcagcggctccagccctggacaccctccccgcccccaccggcctggtcctgagc
caggtgacctcctccagcatccacgtgtcctggactccagccccccggctccccctcaag
tatctgattgtttggcgagcctccagaggtggcacccccagggaggtggtggtggagggg
cctgccgcctccgcagagctgcacaacctgacctcccgcacggagtacctggtctccgtg
ttccccatctacgagggcggggttggcgagggcctgcggggcctggtgaccacagcacct
ctgtctccgccccgggcgctgaccctggccacagtgactcccagaaccatccacctcacc
tggcagccctcggccggggccacccactacctggtgcgatgctcacctgcttcctccaag
ggtgaggaggaggagcgagaggtgcaggtgaggcggcccgaggtgctgctggatggcctg
gaaccaggcagggactatgagatctcggtgcagagcctgcgaggccctgagagcagcgag
gcccggggcatccgtgccaggacccccgtcctggcccccccgagacacctgggcttctca
gacgtgagccacgacacagtgcgagtgatctgggagggcgccccaaggcctgtgcgcctg
gtcagggtcacctatgtctccagcgagggtggacactcggggcagacagagactcctggg
aatgccacctcggccgtgctggggcccctctcttcctccaccacctacactgtccgcgtc
acctgcctctaccctgggggtggctcctctacgctgactggccaggtcaccaccaagaaa
gttcccagcccaagccagctgtccgtgacggagctgccaggggacacagtccagctggca
tgggtggccgcagccccatctggggtgcttgtctaccagatcaagtggacacccctggga
gaggggaaggctcacgagatctctgtcccagggaacctcggcacggccgtcctgcctggc
ctagggaggcacacggagtatgacgtcaccatcctggcctactacagggatggcgcccgc
agtgaccctgtgtccctccgctataccccgtccacagtgaacaggagccccccctccaac
ctggccctggcctcggagacccccgacagcctgcaggtcagctggacacccccacgtggc
cgcgtgctccactaccggctcacctacacgcccgcctctggctcaggacccgagaaatct
gtctccgtgccaggacccaggagccacgtgacactccccgacctgcaggcagccaccaag
tacagggtcctggtctcagctgtctacgcagcaggcaggagtgaggctgtgtctgccacc
ggccagacagcctgcccagccctccgcccggacagctccctcccagggtttgacctgatg
gtggccttcggcctggtggaaaaggcttatgcttccatccggggcgtggccatggagccc
tctgccttcggtgggaccccaaccttcacgcttttcaaggacgcccagctgacaagacgg
gtcagtgacgtccacccagccccgctccctccagagcacaccatcgtcttccttgtgcgc
gtgcttcccgagacgccccgtgaggcctttgcgctgtggcagatgacggccgaggacttc
cagcccgtcctcggggttctgctggacgccgggaggaagtccctgacctacttccaccgc
gaccccagggctgccttgcaggaggccaccttcgacccgcaggaagtgaggaagattttc
ttcgggagcttccacaaggtgcacgtggctgtgggccgctccaaggtcaggctctatgtg
gactgccgaaaggtggctgagcggcccctcggggaggtgggcagcgcaccctctgccggc
ttcatcacactggggaggctggccaaggccaggggcccccggagcagctcagccgcattt
cagctccagacactgcagatcgtgtgcagtgacacctgggccgacgaggaccggtgctgt
gagctccctgcctcgagggatggagagacctgcccggccttcgtgtctgcctgctcctgt
tcctcagagacccctgggcccccagggccccagggacccccaggcctccctgggaggaac
ggcactccgggagagcagggcttccccgggcccaggggtccaccaggggtcaaaggagag
aaaggagaccatgggctcccaggcttgcagggccaccccggccaccagggcatccccggg
agagttggcctccagggaccaaagggaatgagaggcctggagggaactgctggcctgccc
ggaccccctggccccagggggttccagggcatggcaggggccaggggcactggtggagag
cgaggacccccaggggctgtggggcccacagggctgccggggcccaaaggggaacgagga
gagaagggcgagccgcagtccctcgccaccctctaccagcttgtgagccaggcctgtgag
tccgccatccagacacacgtgtcaaagtttgactccttccacgagaacaccaggccccca
atgcccatcttggagcagaagctggagccaggcactgagcccctggggtcccctggcacc
cgcagcaaggccctgcttcctggagaatggaggcatggtagccgccacctagagggcaga
ggggagcctggagctgttggtcagacgggcagccctgggcagcagggggctagcacccag
ggcctctgggagcgacagggtggggtgctgcgagcacaaggcccagcacaggcagaccca
tcagagaatgaccctacccacagccctgcccacaatcctgcccacccacggccctgctgg
acgcagcgtgtggaaacccaggcactggccctgagcctgtgtccaactgtcttcagtctt
tcagatctgtccgcccttctctcctgccgggacattttctgcactgtcccgaggaaccct
gcgccttcctccatggtttgtctggacaccaagagcgaccacatcctggaaaagccagga
gaaaagctcaggaagcacctgcagacccgcctcacgcagggaacagacggctccactgct
gtcccactggtcacctgcacggtggttcctgcctcagaacagcactcccaccctgacccc
agcacctttgcatctgggaacaggcagggtcctgcctgcctcatcgtcccctctgtctcc
agcccaagaaggagtccagatcctgtgtgtctgcaggcagtgccaagtgactgcctgagg
ccccaagagcaaccctggaagctccaggccttcacggtccccccgagagccacctgcaag
gaagaagagaagggaggagaagggctggcctggaatcgggtcgtattccaacaacaggaa
gaagagaagggagaagggctggctcggaaccttgaagggcagattccaaaggtgtccttg
ccactgtcagctacatccccgtggccagacgtcgtcccacggccaagcggagctgcaaga
gtagagccttttctggatcctccctga
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