Methylorubrum thiocyanatum: JCM10893A_10560
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Entry
JCM10893A_10560 CDS
T12001
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mthc Methylorubrum thiocyanatum
Pathway
mthc00900
Terpenoid backbone biosynthesis
mthc01100
Metabolic pathways
mthc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mthc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JCM10893A_10560
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mthc01006
]
JCM10893A_10560
Enzymes [BR:
mthc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JCM10893A_10560
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JCM10893A_10560
2.5.1.29 geranylgeranyl diphosphate synthase
JCM10893A_10560
Prenyltransferases [BR:
mthc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JCM10893A_10560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BGY97554
LinkDB
All DBs
Position
complement(1102648..1103532)
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AA seq
294 aa
AA seq
DB search
MTRESAMDVGRRIETVLDGAVAHAEAPGAPPRLAEAIRYAVFPGGHRIRPRLCVAVALAC
GDDDPAASDAAAGAIELLHCASLVHDDLPCFDDAATRRQKPSVHAAFGVPLAVLTGDALI
VAAFETLARGAARSPARLAALVGLVARAVGSPSGIVAGQAWESEPHVDLVEYQQAKTGAL
FAAATVAGAAAAGAPPLPWRLLGECLGEAYQVADDLRDVACRQEEIGKPAGRDATLGRPN
AAALLGMGGALDRLKRLTEEAIEVIPPCPGQARIRAEIEAQTRLFLPASLRQPA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcgggagagcgccatggatgtcggcaggcggatcgagacggttctcgatggggca
gtcgcgcatgcggaggcgccgggcgcaccgccgcggctcgccgaggcgatccgctatgcc
gtctttcccggcgggcaccgcatccgtccccgcctctgcgttgccgtggcgctggcttgt
ggcgacgacgaccccgccgcgtccgatgccgccgccggggcgatcgagctgctgcactgc
gcctccctggtccacgatgaccttccctgcttcgacgatgcggcgacgcgccgccagaag
ccttcggtccacgccgccttcggcgtgccgctcgcggtgctgaccggggatgcgctgatc
gtcgccgctttcgagacgctggcgcggggcgcggcccgatcgcccgctcggctggccgct
ctcgtcggattggtcgctcgtgccgtcggctccccgtcgggcatcgttgccgggcaggcc
tgggaatccgagccgcatgtcgatctcgtcgagtatcagcaggccaagaccggcgcgttg
tttgccgccgccaccgtcgcgggcgcggccgcggcgggagcgccgcccctgccttggcgt
ctgctcggcgagtgcctcggcgaggcctaccaagtcgccgacgacctgcgcgacgtcgcc
tgccgccaggaagagatcggtaagcccgccggccgcgacgccaccctcgggcgcccgaac
gccgccgctctgctcgggatggggggcgccctcgaccggctcaagcggctgacggaagag
gcgatcgaggtgatcccgccgtgtcccgggcaggccaggatccgcgccgagatcgaggcg
cagacgcgtctgttcctgccggcctccctgcgtcagccggcctga
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