Methylorubrum thiocyanatum: JCM10893A_19310
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Entry
JCM10893A_19310 CDS
T12001
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mthc Methylorubrum thiocyanatum
Pathway
mthc03030
DNA replication
mthc03430
Mismatch repair
mthc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM10893A_19310
03430 Mismatch repair
JCM10893A_19310
03440 Homologous recombination
JCM10893A_19310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mthc03032
]
JCM10893A_19310
03400 DNA repair and recombination proteins [BR:
mthc03400
]
JCM10893A_19310
Enzymes [BR:
mthc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM10893A_19310
DNA replication proteins [BR:
mthc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM10893A_19310
DNA repair and recombination proteins [BR:
mthc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM10893A_19310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_18
AAA_14
AAA_16
RCF1-5-like_lid
AAA_5
TsaE
AAA_assoc_2
SRP54
AAA_19
Rad17
nSTAND3
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BGY98429
LinkDB
All DBs
Position
2046693..2048561
Genome browser
AA seq
622 aa
AA seq
DB search
MDETHGTFPDEPGLPGMPAASAPATAAPPYRVLARKYRPQTFDDLIGQGAMVRTLANAFS
ANRIPQAWMLTGVRGVGKTTTARILARGLNYVRTGQPDTGPTVSMPELGQHCQAIMESRH
MDVLEMDAASHTGIDDVRGIIDGIRYAPVSARYKVYIVDEVHMLSEKAFNAFLKTLEEPP
PHAKFVFATTEIRKVPVTILSRCQRFDLRRVEADVLSAHLKKICAAEGVEAEDEALAAVT
RAAEGSVRDALSLLDQAIAHGAGAVTAAGVRDMLGLADRSRIVDLFEAAMRGDIPAAFAE
IRAQYDAGADPAVVLSDLAGFTHLVTRLKLVPGAEADPTLSEAERVRGAQFAGRLPVRAL
SRAWQILLKALPEVQAAPRPLAAAEMAIVRLAYAADLPTPDEALRQLRADIAASESPGAG
TPRPGGGGAMASHGSAALQMAPPPPSPRPVLASVPSPATASAPAPRPTPAAPASPRLGRF
EDVVAQAEAARDIALKVALERDVHLVRFEEGRIEFRLAPGGRQSLANDLARALDAWTGRR
WVVAVSKEQGAPTLAENSRAAEETRHQNAAAHPLVREVLSRFPGAQIVDVRDKAPEGEGA
ESASESVGPAAPPPEDPEDDDN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgcacggcacgttccccgacgagccgggcctgcccggcatgcccgcagcc
tccgcgccggcgacggccgcgcccccctaccgggtgctggcgcgaaaataccgcccacag
accttcgacgacctgatcggccagggcgccatggtgcgcacgctggccaatgcgttctcg
gccaaccgcatcccgcaagcctggatgctcacgggcgtgcgcggcgtcggcaagacgacc
acggcccgcatcctcgcccgcggtctcaactatgtccgcaccggccagccggataccggc
cccaccgtctcgatgccggaactcgggcagcactgccaagcgatcatggaatcccggcac
atggacgtgctggagatggacgccgcctcgcataccggcatcgacgacgtgcgcggcatc
atcgacggcatccgctacgcgccggtctcggcccgctacaaggtctacatcgtcgacgag
gtccacatgctttcggagaaggcgttcaacgccttcctgaagacgctggaggagccgccg
ccccacgccaagttcgtgttcgcgacgaccgagatccgcaaggttccggtgacgatcctg
tcgcgctgccagcggttcgacctgcgccgggtcgaggccgacgtgctctccgcccatctc
aagaagatctgcgccgccgagggcgtcgaagccgaggatgaggccctcgccgccgtcacc
cgcgcggcggaaggctcggtgcgcgacgcgctctcgctgctcgatcaggcgatcgcccac
ggggcgggcgcggtgacggcggcgggcgtgcgcgacatgctgggtctcgccgaccgttcg
cgcatcgtcgatctgttcgaggcggcgatgcgcggcgacataccggccgccttcgcggaa
attcgcgcgcaatacgatgccggcgccgacccggcggtggtgctctcggatctcgccggc
ttcacccatctcgtcacccggctcaagctggtgccgggcgccgaggccgacccgacgctg
agcgaggcggagcgcgtgcgcggcgcccagttcgccgggcgcctaccagtgcgggcgctg
tcgcgggcgtggcagatcctgctcaaggctttgcccgaggtgcaggccgcaccccgcccg
ctcgcggcggccgagatggcgatcgtgcggctcgcctacgccgccgacctgccgacgccg
gacgaggccctgcgccagcttcgcgccgacatcgccgcctccgagagccccggcgcaggc
actccgcgccccggaggcggcggcgcgatggcctcgcacggctcggcggcccttcagatg
gcgccgccgcccccttcgccgcggccggtgctcgcctcggtcccctcccccgcgacggcg
tccgccccggcgccgcggccgaccccggccgctcccgccagcccccggctcggacgcttc
gaggacgtggtcgcccaggccgaggccgcccgcgacatcgccctgaaggtggcgctggag
cgcgacgtccacctcgtgcgcttcgaggagggccgcatcgagttccgcctcgcccccggc
ggccggcagagcctcgccaacgatctcgcccgggcactcgacgcctggaccggccggcgc
tgggtcgtcgccgtctcgaaggagcagggcgccccgacgcttgcggagaactcgcgggcg
gccgaggagacccgccaccagaatgccgccgcccatccgctggtgcgggaggtgctgtcg
cgcttccccggcgcgcagatcgtcgatgtgcgcgacaaggcgccggagggcgagggggcc
gagagcgcttcggagagcgtcgggccggccgccccgcccccggaagatcccgaggacgac
gacaactga
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