Methylorubrum thiocyanatum: JCM10893A_27520
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Entry
JCM10893A_27520 CDS
T12001
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
mthc Methylorubrum thiocyanatum
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
HTH_30
AAA_2
BrxC_BrxD
HTH_28
FleQ
OKR_DC_1_N
AAA
HTH_23
HTH_1
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BGY99250
LinkDB
All DBs
Position
2887915..2889291
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AA seq
458 aa
AA seq
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MFPEAELPEAEPVVPPARVVLIDDEAMVRLAMEQALQLAGLAVEAYESAEAALPAITRDF
SGIVVSDVRLPGRDGLALLAEIRRRDPELPVVLVTGHGDIAMAVAAMREGAYHFIEKPFV
NEAFVEVVRRALEKRALVTENRRLRHALDRGDAPGGAVERCLVGQSPAMRRLRDDVASLA
SAAADVLVLGETGAGKEQVARALHEGGRRRDKPFVAINCGAIPESMFESEIFGHEAGAFT
GAGKRRIGKVEHASGGTLFLDEVESMPLALQVKLLRVLQERRVERLGSNASVPVDLRVVA
ATKEDLDALSEAGRFRRDLFFRLNVVTLTLPPLRERREDIPLLFERFLVQAAVKYQRPVV
EVPPSLRRSLMLADWPGNVRELKNAAERAVLGFLSPDLAGGPEAAPGLDALLDRVERLVI
EDALKASGQRIAEAARALGLPRKTLSDRMRRLGLSAGD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgaggcggaactgcccgaggccgagccggtcgtgccccctgcgcgggtcgtg
ctgatcgacgacgaggcgatggtccggcttgccatggagcaggcgctgcagctcgccggc
ctcgcggtcgaggcctacgagagcgccgaggcggcgctcccggccatcacccgcgacttc
tctggcatcgtcgtcagcgacgtgcgcctgccgggccgcgacggcctcgccctcctggcc
gagatccgccgccgcgaccccgaattgccggtggtgctcgtcaccggccacggcgacatc
gccatggcggtcgccgccatgcgcgagggcgcctaccatttcatcgagaagcccttcgtc
aacgaggccttcgtcgaggtggtccgccgcgccctggagaagcgggcgctggtgaccgag
aaccgccgcctgcgccacgccctcgaccggggcgacgcgcccggcggcgcggtggagcgc
tgcctcgtcggccagtcgcccgccatgcggcggctgcgggacgacgtcgcctcgctcgcc
tccgccgccgccgacgtgctggtgctcggcgagaccggggccggcaaggagcaggtcgcc
cgcgccctgcacgagggcggccgccgccgggacaagccgttcgtcgcgatcaattgcggc
gcaatccccgagagcatgttcgagagcgagatcttcggccacgaggccggcgccttcacc
ggggcgggcaagcgccgcatcggcaaggtcgagcacgcgagcggcggcaccctgttcctc
gacgaggtcgagagcatgccgctggcgctacaggtgaagctgctgcgggtgctgcaggag
cggcgcgtcgagcggctcggctccaatgcgagcgtgccggtggacctgcgggtggtcgcc
gccaccaaggaggatctcgacgcgctctccgaggccgggcgcttccgccgcgacctgttc
ttccgcctcaacgtcgtcaccctgaccctgccgcccctgcgcgaacggcgcgaggacatc
ccgctgctgttcgagcgctttctcgtccaggcggcggtgaagtaccagcgcccggtggtc
gaggtgccgccgtccttgcgccgctcgctgatgctcgccgactggccgggcaacgtgcgc
gaattgaagaacgccgccgagcgggccgtgctcggtttcctcagcccggatctggccggc
ggtcccgaggcggcgccggggctcgacgccctgctcgaccgggtggagcgcctcgtcatc
gaggacgcgctgaaggcctccggtcagcgcatcgccgaggccgcccgggcgctcggcctg
ccgcgcaagacgctctccgaccgcatgcggcgcctcggcctgagcgcgggcgactga
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