Methylorubrum thiocyanatum: JCM10893A_36110
Help
Entry
JCM10893A_36110 CDS
T12001
Name
(GenBank) transcription antitermination factor NusB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
mthc Methylorubrum thiocyanatum
Brite
KEGG Orthology (KO) [BR:
mthc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mthc03009
]
JCM10893A_36110
Enzymes [BR:
mthc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JCM10893A_36110
Ribosome biogenesis [BR:
mthc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JCM10893A_36110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
FtsJ
RsmF-B_ferredox
Methyltransf_23
Methyltransf_12
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
BGZ00110
LinkDB
All DBs
Position
complement(3769684..3771048)
Genome browser
AA seq
454 aa
AA seq
DB search
MASTPNRSTPPPFDPSVPGLAARHVAREAVATLLGPARGLALEDALAQAARGARLEPGEA
ALARAIATASFRRLGFIQAALAARLRDGLPENRPHLLALLVTGAAQILDLAVADHAAVDL
SVRLAKADPQLQHLAPLVNAVLRRIVRERDAIRAEETDPLAHNTPDWLARRWRAAYGEAA
ARAIAAAHLEGAAVDLTLARDPEIWAERLGGVRLDLGSVRLVEAREAVADLPGYAEGVWW
VQDAAAALPVRLLAPESGERVADLCAAPGGKTAQIAAAGAAVTAIDRSAARLERLGRNLE
RLGLTAEVLTTDALALPEDTPFDAVLLDAPCSATGTLRRHPDVAWTKSETDVFRLVGLQR
RLLDKAARLTRPGGRLVYCTCSLEPEEGSGQIADFLNRHPDFERIAITPDRVAGHAELID
PSGDLRTLPSHLAGGTGRAGGLDGFFASLLRRKD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggcatccacacccaaccgcagcacgccgcctcccttcgatccgtcggtgccgggcctc
gcggcgcgtcacgtcgcgcgcgaggcggtggcgacgctgctcggccccgcccgcggcctg
gcgctggaggatgccctcgcccaggcggcacggggcgcgcggctggaaccgggcgaggcc
gccctcgcccgggcgatcgcgacggcgagcttccgccgcctcggcttcatccaggcggcg
ctcgccgcccggctgcgggacggcctgccggagaaccggccccaccttctcgcgctgctg
gtgaccggcgctgcgcagatcctcgatctcgcagtggccgaccacgccgccgtcgatctc
tcggtgcgtctcgccaaggcggacccgcagctccagcacctcgcgcccctcgtcaacgcc
gtgctgcgccggatcgtccgggagcgcgacgcgatccgggccgaggagaccgatccgctc
gcccacaacacgccggactggctcgcccgccgctggcgggcggcctacggcgaggcggcg
gcccgcgccatcgcggccgcccatctggaaggcgcggcggtcgatctcacgctggcgcgc
gacccggagatctgggccgagcggctcggcggtgtccgcctcgatctcggctccgtgcgg
ctggtcgaggcgcgggaggcggtggccgatctccccggctacgcggagggcgtgtggtgg
gtgcaggacgccgctgccgccctgccggtgcggctgctcgcgccggaatcgggggagcgg
gtcgccgatctctgcgcggcgccggggggcaagacggcccagatcgccgccgcgggcgcg
gcggtgacggcaatcgaccggtccgccgcccgcctggaacgcctcggtcgcaacctcgaa
cgcctcggcctcaccgccgaggtcctgaccaccgacgctctcgccctgccggaggacacg
cccttcgacgcggtgctgctcgacgcgccctgctcggcgaccggcaccctccgccgccat
ccggacgtggcctggacgaagagcgagacggacgtgttccgcctcgtcggcctccagcgc
cggctcctcgacaaggcggcgcggctgacgcggcccggcggacgcctcgtctactgcacc
tgctccctcgaacccgaggagggcagcgggcagatcgcggatttcctgaaccgccatccg
gatttcgagcggatcgcgatcacgcccgatcgagtggccggccatgccgagctgatcgac
ccgtcgggcgaccttcgcaccctgccgagccatctggccggcggcaccggacgggcaggc
ggcctcgacggcttcttcgccagcctgctgcggcggaaggactga
DBGET
integrated database retrieval system
