Methylorubrum thiocyanatum: JCM10893A_39720
Help
Entry
JCM10893A_39720 CDS
T12001
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mthc Methylorubrum thiocyanatum
Pathway
mthc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mthc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JCM10893A_39720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthc03400
]
JCM10893A_39720
Enzymes [BR:
mthc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JCM10893A_39720
DNA repair and recombination proteins [BR:
mthc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JCM10893A_39720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BGZ00471
LinkDB
All DBs
Position
complement(4158908..4159522)
Genome browser
AA seq
204 aa
AA seq
DB search
MLDAALYDRLLGVAAEVSEPLRTAIAAIGVIEIAPPPHASLAERLFVEVVNQQLSTKAAL
SIWTRIEAAAAAQVVTPRDLFVPGHEAVLRGCGVSANKVRALHAIREAEEAGLLGPDLAA
LPHAERSAVLCRIRGVGPWTADMAGIFHFLDPDIWPAGDVAAVGVLRRLTGIEDTVAVAA
RFAPYRSILARYMWRSRDAAPVAA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgccgccctgtacgaccgtctgctcggcgtggccgctgaggtctcggagccg
ttgcggaccgccatcgcggcaatcggtgtcattgagattgcaccgccgcctcatgccagc
ctcgccgagcggctgttcgtcgaggtggtgaaccagcagctctccaccaaggctgccctc
tcgatctggacgcggatcgaggcggccgctgcggcgcaggtcgtgacaccgcgcgatctg
ttcgttcccggtcacgaggcggtgctgcgcggctgcggcgtctcggcaaacaaggtgcgc
gcgcttcacgccatccgcgaggccgaggaagccggcctgctcggaccggatctcgccgcg
ctgccgcacgcggagcgctcggccgtgctctgccgcatccgtggcgtcggtccatggacg
gccgacatggccggcatcttccatttcctcgatcccgacatctggccggccggcgacgtg
gccgcggtcggcgtgctgcgccggctgacaggcatcgaggacacggtcgccgtcgccgcg
cgcttcgcgccgtaccgctcgattcttgcccgctacatgtggcgcagccgggacgccgct
ccggtcgcggcctga
DBGET
integrated database retrieval system
