Methylorubrum thiocyanatum: JCM10893A_47190
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Entry
JCM10893A_47190 CDS
T12001
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
mthc Methylorubrum thiocyanatum
Brite
KEGG Orthology (KO) [BR:
mthc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mthc03009
]
JCM10893A_47190
Enzymes [BR:
mthc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
JCM10893A_47190
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
JCM10893A_47190
Ribosome biogenesis [BR:
mthc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JCM10893A_47190
23S rRNA modification factors
JCM10893A_47190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_11
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BGZ01218
LinkDB
All DBs
Position
complement(4944527..4945276)
Genome browser
AA seq
249 aa
AA seq
DB search
MTGERLRADRFLVEHGHFRSRAQARAAIEAGLVRADGSLVTRPSDLIGAGARIEASAPHP
YVSRGGLKLAAALDAFGLDPAGLRCLDVGASTGGFTDVLLRRGAAHVHAVDVGRDQLDAA
LRADPRVTSLEGTDIRTLAPGAIEPAPRLATIDVSFIGLRLVLPAVAAQLAGEAALAALI
KPQFEAGRERVGRGGIVRDAEVHAEVCEGVRAVLVGLGFTVSGPIPSPIEGGDGNREFLV
AARRSAHDE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgagcggctgcgggccgaccggttcctggtcgagcacgggcatttccgcagc
cgggcgcaggcgcgggcggcgatcgaagccggcctcgtccgcgccgacggctccctcgtc
acccgcccctcggacctcatcggcgcgggcgcgcggatcgaggcctcggccccccacccc
tacgtctcccgcggcggcctcaagcttgcggccgcgctcgacgcgttcggcctcgacccc
gccggcctgcgctgtctcgacgtcggcgcctcgaccggcggcttcaccgatgtgctgctg
cggcgcggcgccgcccatgtccacgccgtcgatgtcggccgcgaccagctcgacgccgcc
ttgcgcgccgacccgcgggtgaccagcttggagggcaccgacatccgcaccctcgccccc
ggcgcgatcgagcccgcgccgcggctcgccaccatcgatgtcagcttcatcggcctgcgg
ctggtcctgccggcggtggcggcgcagctcgccggggaggcggcgctcgccgcgctgatc
aagccgcaattcgaggccggtcgcgagcgggtcgggcgcggcgggatcgtgcgcgacgcg
gaggttcatgccgaggtctgcgagggcgtgcgcgccgtgctcgtcggcctcggcttcacc
gtatcgggaccgatcccctccccgatcgagggcggcgacggcaaccgcgagtttctggtc
gccgcgaggcgctccgctcatgatgaatga
DBGET
integrated database retrieval system
