Microbulbifer thermotolerans: A3224_01880
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Entry
A3224_01880 CDS
T04393
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mthd
Microbulbifer thermotolerans
Pathway
mthd00040
Pentose and glucuronate interconversions
mthd01100
Metabolic pathways
mthd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A3224_01880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3224_01880
Enzymes [BR:
mthd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A3224_01880
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GFIT
Motif
Pfam:
Pectate_lyase_4
PanZ
Motif
Other DBs
NCBI-ProteinID:
AMX01492
UniProt:
A0A143HJP2
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Position
complement(466880..468880)
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AA seq
666 aa
AA seq
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MKTYTKIPAVLGALFGGLMSVWTSAQDLGPNLALSGGADGSSKASGTSYGNAVDGNLQTY
WQPRSSSSERISAKKFGGSFNTVIIREIGNAVQGWRLLNHDTGAELASGNGIGSAMQVYL
GNVSMNKIDLMIDSATSAPRIAEFEIYNASGGSSSSSGSSSSGGSSSSSSSGGSSSSSSS
SSSSGGSSSSSSGGISNACYTLATDPNVNWRDSSELDTDQKIVKCLSDTLGRALGYGENA
LGGYDPGGSSKLTVITKNDPQGRSVEQQILDAISGDTHNWIVFDKFDFAQETEIAMYRTH
CGDASVQAAIDGTQAQCIDYRQWCAAKGYGSGQSCLDEFFNERLNDKNLPIRNPVIGSNK
TIDGRLSKAYFRFSGFAIGKDSSGQPTQTAENVILTHLDFRGAGHTEDHGLDPDMIRSTG
ASHDIWIHKNTFDTTGDSAFDVKVGAYDITMSFNRLVNVKRATLHGSSDSRTINEQITTT
MHHNAFVTTDDHYSTLGNTLRRVPLIRRGTSHMFNNLFMNYRKDVLSVRVGASVLWEDNA
FLINRDHQEKSDPHAALDERAAQLARDVGGGNFRSEGSRVWFSDAQCNLDSAYVREITDA
SGSVGNLSQNYTQRSRDAIQAHWLPAGQDLVDYISATAGKGRRAPFNSPLAHDINYVVGL
GEIPCQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttatacaaaaattccggcagtgctcggcgcattgttcggcgggttaatgtcg
gtctggacctcggctcaagatctgggcccaaacctagcactgtccggtggtgccgatggc
agcagcaaagccagcggaaccagttatggcaatgcggtcgatggcaacctgcaaacctac
tggcaaccccgctcttccagcagcgaacgcatttctgcaaaaaagtttggcggaagcttt
aatacggtgatcattcgcgagataggcaacgcagtacaggggtggcgcctgctcaaccac
gacaccggcgcagagctggcatccggcaacggtataggatcggccatgcaggtttatctc
ggcaatgtatccatgaacaaaatcgacctgatgatcgacagcgccaccagtgcaccgcgg
attgccgaattcgagatctacaatgcgagcgggggcagtagctcctcgtcgggaagttcc
agctccggcggctcatcctccagtagctctagtggaggttcctccagcagctccagctcc
tccagttccagcggcggctcatccagcagtagcagtggtggaatcagcaatgcctgctac
accctcgccaccgatccaaacgtcaattggcgcgattcctccgaactggatacggatcag
aaaatcgtcaagtgcctgtccgacacccttggtcgcgcactcggctacggtgaaaacgct
ctcggaggttacgacccgggcggtagcagcaaactaactgtcattacaaaaaatgatccc
cagggccgctccgtagaacagcagattctcgacgccatcagcggcgacacgcacaactgg
attgtgttcgacaaatttgattttgcccaggaaaccgagatcgccatgtatcgcactcac
tgcggtgacgcttccgtacaggcggccatcgacggcacccaggctcagtgcatcgactac
cggcaatggtgcgccgccaagggctatggttccggccagtcctgcctggatgaattcttt
aacgagcggctgaacgataaaaacctgccgatccgcaacccggtgatcggttccaacaaa
actatcgacggtcggctcagcaaagcctatttccgcttcagtggctttgccatcggcaag
gacagttccggacagcccacccagactgcggaaaacgtcatcctcacgcatctggatttc
cgcggcgcagggcacaccgaagaccacggtctggaccccgatatgatccgctccaccgga
gcctcccacgatatttggattcacaaaaatacctttgataccaccggcgattcggcgttt
gacgtgaaagtgggtgcctacgacatcaccatgtccttcaaccgcctggtaaatgtaaag
cgggcaaccctgcatggctccagtgatagccgtacgattaacgagcaaatcaccaccacc
atgcatcacaacgccttcgtcaccaccgacgaccactattccacactgggcaacacactg
cggcgcgtaccgctgattcggcgcggaacctcgcatatgttcaacaatttgttcatgaac
taccgcaaagatgtactcagtgtacgcgtgggcgccagtgtgctgtgggaggacaacgcg
tttttgatcaaccgcgaccaccaggaaaaaagtgatccgcacgccgcactggacgagcgc
gccgcacagttggcacgagatgtgggtggaggtaacttccgtagcgaaggttcccgcgtc
tggttctccgacgcccaatgtaacctggacagcgcctacgtgcgtgagatcactgacgcg
tccggatccgtgggcaatctcagccaaaactacacgcaaaggtcccgcgacgccattcaa
gcccactggttacccgcagggcaagatctggtggactacatcagtgccactgctggcaaa
ggccgccgcgcccccttcaattcccccctggctcacgacatcaactatgtggtcggcctg
ggtgagatcccctgtcagtag
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