Microbulbifer thermotolerans: A3224_01885
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Entry
A3224_01885 CDS
T04393
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mthd
Microbulbifer thermotolerans
Pathway
mthd00040
Pentose and glucuronate interconversions
mthd01100
Metabolic pathways
mthd01120
Microbial metabolism in diverse environments
mthd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A3224_01885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A3224_01885
Enzymes [BR:
mthd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A3224_01885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AMX01493
UniProt:
A0A143HIJ1
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All DBs
Position
complement(469043..470623)
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AA seq
526 aa
AA seq
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MKAKTKIPVALGALLGSLLAPTWASAQPVGYATLNGGTTGGAGGQVVYATTGTEIHKALC
NRASKSTPIIIHVEGTINHGNTSKVSGSSCNTADDKIEIKDVSNISIIGVGRGALFDQIG
IHLRNSSNIILQNLHVRNVKKSGSPTSNGGDAIGMESNVRNVWADHLTLEASGGESEGYD
ALFDIKASTKYVTLSYSILRNSGRGGLVGSSDSDSDNGPITFHHNLYENLDSRTPLLRHG
TAHSFNNHFRGIKKSGMNPRIGGRIKAENNYFEDSKDVLGTFYTNDMGYWDVRGNIYSNI
TWTNDKDKNHPAGPNPKSTTSISIPYSYKLDDAGCVPQIVLATAGANKGMLRSDGNCQSQ
GGSSSGGGSSSSSSSSSSGSSSSGGSSSGGSSSGGSSGGSSDLGPNLALSGDADGSSKAS
GTSYGNAVDGDLQTYWQPNSSSGERISAKKFGDNFNTVIIREIGNAVQNWRLVNHDTGAQ
LASGNGIGSSKKIYVGNVSMKKVDLMIDSASSAPRIAEFEVYNASQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaaaactaaaattccggtggcgctcggcgcgctgctgggcagtctgctagcg
ccgacatgggcgtcggcacaaccagtgggttatgcaaccttgaacggtggtactaccggc
ggtgcaggaggccaagtcgtctacgccaccaccggcaccgagattcacaaggcgctgtgc
aaccgtgcatccaaaagcaccccaattattattcacgtcgaagggacaattaatcacggc
aacaccagcaaggtctccggcagcagctgtaacaccgccgacgataaaatcgagataaaa
gatgtcagcaatatttcgattattggtgtcggcaggggtgcccttttcgatcaaataggt
atccacctgcgcaattcttcaaacatcattttgcagaatctgcatgtgcgcaatgtgaag
aaatccggctcgccgacatctaacggcggcgacgctatcggcatggagagcaatgtccgc
aatgtgtgggcagaccacctgaccctggaggcctcgggcggtgagagtgaaggctacgat
gcacttttcgatataaaagcctccaccaaatacgtcaccctctcctacagcattttgcgc
aactccggccgcggtggcctggtcggctccagcgatagcgacagcgataatgggccgatc
accttccaccacaacttgtacgaaaacctggattcgcggacgccgctgttgcgccacggc
actgcccactcctttaataaccacttccggggtattaagaagtcgggcatgaatccgcgg
attggcggacgtatcaaggcggaaaataattattttgaagactccaaagatgtattggga
accttctacaccaacgatatgggatattgggatgtgcgcggcaacatctactccaatatc
acctggactaacgataaggacaaaaaccatccggcgggtccgaatccgaagtcaacaacc
tcaatcagcattccctattcttacaagctagacgacgccggttgtgtaccacaaattgtg
ctggccaccgccggtgccaacaaaggtatgctgcgttccgacggcaactgccaaagtcag
ggcggttcttcttccggcggcggttcctccagcagttccagctcctcatctagcggtagc
tcttcatctggaggctcttcatccggtggctcttcatccggtggctccagcggcggttcc
tccgacttgggtccgaacttagcgctctccggcgatgccgatggtagcagcaaggccagc
ggtaccagctatggcaatgcggtggacggcgacctgcaaacctactggcagcccaattct
tccagtggcgagcgtatttccgcgaaaaaattcggcgataatttcaataccgtgatcatt
cgcgaaatcggtaacgctgtacagaattggcgcctggttaaccacgataccggagcacaa
ctagcgtccggaaacggtatagggtcgtccaaaaaaatctatgtcggcaatgtctccatg
aaaaaagtcgacctgatgatcgacagtgccagcagcgcgccgcggatcgccgaattcgag
gtctacaatgcgtcccagtaa
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