Microbulbifer thermotolerans: A3224_06275
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Entry
A3224_06275 CDS
T04393
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mthd
Microbulbifer thermotolerans
Pathway
mthd03410
Base excision repair
mthd03430
Mismatch repair
mthd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3224_06275
03430 Mismatch repair
A3224_06275
03440 Homologous recombination
A3224_06275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthd03400
]
A3224_06275
DNA repair and recombination proteins [BR:
mthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A3224_06275
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A3224_06275
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A3224_06275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMX02241
UniProt:
A0A143HL54
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All DBs
Position
1486046..1487773
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AA seq
575 aa
AA seq
DB search
MNTRIQRRPVDLSTGRFASDTPKILQRVLLGRGVTSEAELDHRLARLHPPQTMRGVDTAV
RLIAEAIRAQEKILIVGDFDADGATSSTLAVLALGAMGAASVDFLVPNRFDYGYGLTPEI
VMVAKEYEPALLITVDNGISSIDGVAAAKASGMKVVVTDHHLPGEQLPDADAIVNPNQPG
CQFPSKNLAGVGVIFYLLSRLRTALVESGWFADQGISPPNMADYLDLVALGTVADLVPLD
HNNRILVHQGIARIRAGRCRPGIAALLEVAGRDQRRLSTTDIGFILGPRINAAGRLDDIG
TGIRCLLTRDPSEARELAAELDALNRDRKAIEQGMQREAMAALEKLQLEGEIPWSLCLYD
ENWHQGVVGILASRIKEKFHRPVIAFADGDNGLIKGSARSIPGLHIRDTLSDVDAAHPKL
ITKFGGHAMAAGLSLPAEKFPAFVDAFEAAVRNRLTEKQLQAVIDSDGELEPHEFTLQTA
ATLRACAPWGQAFPEPLFDGEFLLLQQRIVGERHLKMVLAPLQSPQQALDAIAFNVDTEQ
WPRPVDRVRVAYKLDINEFRGRESLQLLVTYLEAM
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaagaattcagcggcggccagtggatttgtccactggccgttttgcttctgat
acccccaaaattctgcagcgggtgctgctcggtcgcggagtcacttccgaggcggaactg
gaccaccgtttagccaggctgcatccaccccagaccatgcgcggtgtggacaccgccgtg
cgcctgattgccgaagcgattcgggcgcaggaaaaaatactgattgtcggtgacttcgat
gccgacggcgccactagcagtaccctggcggtgttagctctcggtgccatgggtgcggcg
agtgtcgatttcctggttcccaatcgttttgattacggctacggcctgacaccggaaatc
gtgatggtggcaaaggaatatgagcccgctctgctgattaccgtcgataacggtatcagc
tccatagacggcgtggccgcggccaaggcctccggtatgaaggtggttgtcaccgatcac
catttgccgggagaacaattgcccgatgccgatgcgatcgtcaatcccaaccagccgggt
tgccagttcccaagtaaaaatctggccggtgtgggggtcattttttatttgctcagccgc
ctgcgcaccgccctggtggagagcggctggttcgcggatcaaggtatcagcccgcccaat
atggccgactacctggatctggtggcgctgggcacagtcgctgacttggtaccgctggat
cacaataaccgtattttggtgcaccagggtattgcccgcatccgcgcgggccgctgccgg
cccgggatcgccgccctgctggaagtggccgggcgggatcagcgcagactgtccacgaca
gatatcggttttatcctcggtccgcgtatcaatgccgccgggcgcctggatgacataggt
accggtatccgctgcctgctgacccgcgatccatccgaggcccgtgaactggccgcggaa
ctggacgccctcaatcgcgaccgcaaggcgatagagcagggcatgcagcgcgaagccatg
gcggcgctggaaaagctgcagctggagggcgagatcccttggagcctgtgcctgtatgat
gaaaactggcaccagggtgtggttggcattctcgccagtcgcatcaaggaaaaatttcac
cgtccagtgatcgcctttgcggacggggacaacggtctgatcaaggggtccgcccgttcg
attccgggattgcatatccgcgataccctgagcgacgtggacgcagcccaccccaagctg
attaccaagttcggcggccacgccatggccgctggactcagccttccggcggagaagttt
cccgcgtttgtagatgcctttgaagcggcggtgcgcaatcgactgacagaaaagcagctg
caggcggtgattgactccgatggcgaattggagccgcacgaatttacactgcagacggct
gcgaccctgcgcgcctgtgcgccctggggacaggcgttccccgagccgttgttcgatggt
gaattcctgttgctgcagcagcgtattgtcggcgagcgccacctgaaaatggtccttgcc
ccgttgcaaagtccgcagcaggcactggatgccatcgccttcaatgtggatacggagcag
tggccgcggccagtggatagggtccgggtggcttacaagctcgatatcaacgaattccgc
ggccgtgaatccctgcaattgttggtaacttatctcgaagcgatgtga
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