Microbulbifer thermotolerans: A3224_06730
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Entry
A3224_06730 CDS
T04393
Name
(GenBank) RNAse R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mthd
Microbulbifer thermotolerans
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mthd03016
]
A3224_06730
Enzymes [BR:
mthd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A3224_06730
Transfer RNA biogenesis [BR:
mthd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A3224_06730
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
CheZ
TilS
S_4TM
Motif
Other DBs
NCBI-ProteinID:
AMX02317
UniProt:
A0A143HLC1
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All DBs
Position
complement(1593883..1595829)
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AA seq
648 aa
AA seq
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MLNADALQKLKQLKSDIRSNKEFAEGRVRGSNGKFGFVVLDDGREAFLPPAEMERVFPGD
RVRVSLTEEDKGKLSAELDELLESELKFLVGQYVQRGQGHFVQPSEVGLNRWIFLPPKAR
GKAQPGEFIACKISRHPFRDGKAQAKVETVIGKPDMPGIEHAYVVAQHQLPERFSPAAMK
QAEEIKGRIEAITAERTDLSELGFVTIDAPTTLDMDDALAVSKRDSGWSLHIAIADPSCL
IEEGSPLDKEAFKRAHSQYLPGETLPMLPNDLCENLFSLVQGELRPALVLHIDIESDGTI
GDSRYEFAAIRSRHKLSYEQVANFIEGDDSAVPEDQKESLRNLSDLCTARTAYRASHSLT
MEERPDYAIFLNEQRKIERIEKQERNVAQRMVEEAMLAANISVGRQLAAMQQGCFSVHLG
FRDERMGEIRSLLKETLPEYADKDLHQLDNYLALVKHLENHSEPQMQDLLAVLKRMLRPG
QLANKPGAHLGLGLEAYATVTSPIRKYNDLHNHRVLRAAAQSQQAKALSDEQVEALQDSL
IRGRQANRALEQWLYAQYLQDKTGQVFEGKITQVNGAGLGVRLDENGIDGFVRLNGDKKN
LPEFDGKYLKLTHNKVTYKLDQPVTVKVSAVDIDKRRIALELVATENA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgccgacgcgctccaaaaactcaaacaactgaaatccgacatccgctccaac
aaggaattcgccgaagggcgggtacgtggcagcaacggcaagtttggttttgtcgtgctg
gacgacgggcgcgaagccttcctgccgccggcagaaatggagcgtgtgtttcccggtgac
cgggtgcgcgtcagccttaccgaagaggacaaaggcaagctgtcagccgaactggacgaa
ctgctggaaagtgagctcaaattccttgtcggccagtatgtacagcggggccaggggcac
tttgtgcagcccagtgaagtggggctgaaccgctggatctttctgccgcccaaagcccgt
ggcaaggcgcagccgggggagttcatcgcctgcaagatcagccgccacccgttccgggac
ggcaaggcccaggccaaggtggaaaccgtcatcggcaaaccggatatgcccggtattgaa
cacgcctacgtggtcgcccaacaccagttgccggagcgcttcagcccggcggcaatgaag
caggcggaagaaatcaaagggcgaatcgaggcaatcaccgccgaacgcacagatctctcg
gagctgggcttcgttaccatcgacgcccccaccacactggatatggatgacgcccttgcc
gtcagcaagcgcgacagtggctggtccctacacattgccatcgccgatccctcctgcctg
atcgaagaaggtagcccgctggataaagaggcattcaagcgcgcccacagccaatacctg
cccggcgaaaccctgccgatgctgcccaacgatctgtgtgaaaacctcttttcactggtg
cagggcgagctgcgccccgctctggtgctgcatatcgatatcgaaagcgacggcaccatc
ggcgacagccgctatgagttcgcggccatccgctcccgccacaaactcagctacgagcag
gtagcaaactttatcgaaggcgatgacagcgccgtgcccgaggaccaaaaggaaagcctg
cgcaacctgtccgacctctgcacagcgcgtacggcctaccgcgccagccactcgctgact
atggaggagcgccccgactacgccatcttcctgaacgaacagcgcaaaatcgaacgcatc
gagaaacaggagcgcaacgtcgcccagcgcatggtggaagaggcaatgctcgccgccaat
atctccgtcgggcgccagctcgcagcgatgcaacagggctgcttctccgtgcatttaggt
ttccgcgacgaacgcatgggtgaaatcagaagcctgctcaaggaaaccctgccggaatac
gcagacaaagatctgcaccaactggacaattacctggcgctggtcaagcatctggagaac
cacagcgaaccgcaaatgcaggacctgctcgcggtgctcaagcgcatgctgcgccccggc
cagctcgccaacaaacccggcgctcacttgggcctgggcctggaagcctacgccactgtc
acttcaccgatccgcaaatacaacgacctgcacaaccaccgggtactgcgtgccgccgcg
cagagtcagcaggccaaggctctgagtgacgaacaagtcgaggcccttcaagacagcctg
atccgcggccgccaggccaaccgcgccctggagcagtggctctacgcacagtatctgcaa
gacaagacaggccaggtcttcgaaggaaaaattacccaagtcaacggcgcaggcctcggc
gtaaggctggatgaaaatggcattgacggctttgttcgcctaaatggcgacaagaaaaac
ctgcccgagtttgatggcaaatacctcaaactgacccacaacaaagtcacttacaaactc
gaccagccagtgaccgtgaaggtaagcgctgtcgatatcgacaagcgccgtattgccctg
gaactggtcgccaccgaaaacgcataa
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