Microbulbifer thermotolerans: A3224_09105
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Entry
A3224_09105 CDS
T04393
Name
(GenBank) DNA/RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mthd
Microbulbifer thermotolerans
Pathway
mthd03420
Nucleotide excision repair
mthd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3224_09105
03430 Mismatch repair
A3224_09105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mthd03400
]
A3224_09105
Enzymes [BR:
mthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3224_09105
DNA repair and recombination proteins [BR:
mthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3224_09105
MMR (mismatch excision repair)
Other MMR factors
A3224_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_22
AAA_25
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
AMX02719
UniProt:
A0A143HLZ3
LinkDB
All DBs
Position
2161192..2163408
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AA seq
738 aa
AA seq
DB search
MQQLTEEQQAIADHPGGHAKIIAVAGSGKTTALLHYVKKRLQAGVPAERILVLMYNRSAK
EDFERRLQSLVHGAAPAVHTFHSLGYRLYQRMISSGHITPANLTPLPQSVVQLQIWKAIE
KCAPPYELEEIRARKQSEVEAAEFFIDYTKTILSGDLSAYQELKLGDEYLYFLKVFRAFE
SWRRSQNAVTYADLIYDPALLLSLEPDIAEQYGSHYEDILVDEYQDINEVQHFLLRVLYG
KSGNVIAIGDPDQTIYEWRGSKPKFLLTYFDGDFPPSNVYHLSRTFRYGHQLSLAANHFI
GHNRERADIFCVSADCKQRTDIELVQTDRETHWLVEHLRRRQKHAQPLGQTAILVRLWSV
AAPVELALLANNIPYKSANSNTVLSRRELRPLFWSLNIAAGRFAQLPAKKREQGIYEWLT
APHIRVPRKVLEPVCVRLAKRDSDWGKYLLELIPESLSKGQKKRMRQRAELLMEVENWRG
LAGELLRRQLAALDYLNGISDDSFTRQQGEERKQTILAFCQFLDTLKQPPAEALQHLQAL
QRQHREGEQAQADAVQITTMHQAKGLEWDDVIIPSLSQYTMPYQPQREFTTPASVESERR
LMYVAVTRARRRLYLLAPPLAPDKNSGGAEQQPSLFIEEMQLPLCKLIDNALRERPAQIQ
SPFPVTRQALRYMEACDYNPEIQGPRAPVRKPIPGEGIRHRKLGHGRVIKWEDDRVEVLF
SDRQVRLFVWEKLQQFLL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaactcacagaagaacaacaggccatcgccgaccaccccggcggccacgccaag
atcattgcggtcgccggttccggcaaaaccaccgcgctgctgcactatgtcaaaaaacgc
ctgcaagctggagtacccgcggaacggatactggtgcttatgtacaaccgcagcgcgaag
gaggattttgagcgtcgcctgcaatcgctggtgcacggcgcagccccggcggtgcacact
ttccacagcctcggctaccgcctctaccagcgtatgatctccagcggccatataacaccg
gccaaccttactcccctgccccaatcagtggtgcagttacagatctggaaggcgatcgaa
aagtgtgctccgccttacgagctggaggaaatccgcgcccgcaagcagtcggaagtggag
gctgcggaattttttatcgactataccaagacgatactcagcggtgacctcagcgcttac
caggagctcaagctcggcgacgagtatttatatttcctcaaggtattccgcgctttcgaa
agctggcgccgcagccagaatgccgtaacttatgcggacctgatttacgatccggcactt
ctgctcagcctggaaccggatatcgccgaacaatacggcagccactacgaggatatcctg
gtggacgaataccaggatatcaatgaagtacagcattttctcctgcgcgtactgtacgga
aaatccggtaatgtgatcgccattggcgacccggatcaaaccatctacgaatggcgcggc
tccaaaccgaaattcctgctcacctatttcgacggcgatttcccaccgtccaatgtctat
cacctgagtcgcaccttccgctacggacatcagttgtccctggccgcaaaccactttatc
ggtcacaaccgcgagcgtgcggatatattttgcgtgtctgcggattgcaaacagcgcacg
gatatcgaactggttcaaacagaccgggaaactcattggctggtggagcacctgcgccgc
cgccaaaaacacgctcaacccctggggcaaaccgcaattctggttcgcctctggtcggtg
gccgcccctgtggaactggcgctgctggccaacaacattccctacaagtcggccaacagt
aatacggtactgtcgcggcgcgaactgcgcccgcttttctggagcctgaatatagccgcc
ggccgctttgcccaactgcccgcgaaaaaacgcgaacaaggcatctacgaatggctgacg
gctccccacatccgcgttccgcgcaaggtactggaacctgtctgcgttcgactggccaag
cgcgacagtgactggggcaaatacttgctggaactgattccggagtctttaagcaaggga
caaaaaaaacggatgcggcaacgcgccgaacttttgatggaggtggaaaactggcgcggc
ttggccggcgaacttctccgccgccagttggcggccctggactacctcaacggcatcagt
gacgacagcttcacccgccagcagggagaggagcgcaaacagacgattctcgccttctgc
cagttcctggataccctcaaacagccccccgccgaagctctgcagcacctgcaagcactg
caacgccagcaccgcgaaggtgaacaggcgcaagcggatgccgtacagattacaaccatg
catcaagcgaaagggctggaatgggatgatgtcattattccttccctaagccagtacacc
atgccctatcagccacagcgggagttcaccacgccggcttcagtggaaagcgaacgccgc
ctgatgtatgtggccgtgacccgtgcacgccgccgcctctatctgctcgcaccaccactg
gcacccgataaaaacagtggaggcgcggaacaacagccatcgctgtttatcgaagaaatg
cagcttccgctgtgcaaactgatcgacaacgccttgcgcgagcgcccggctcagatccaa
agtcccttccctgtcactcgtcaagcactgcgctatatggaggcctgcgattacaacccg
gaaatccaaggtccccgagcaccagtgcgtaaacccatccccggcgaaggtatacgccac
cgcaagctgggccacgggcgagttatcaaatgggaagacgacagggtcgaggtgctgttc
agcgaccgccaggtgcgcctttttgtctgggagaagctacaacagtttctgctgtag
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