Microbulbifer thermotolerans: A3224_11585
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Entry
A3224_11585 CDS
T04393
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mthd
Microbulbifer thermotolerans
Pathway
mthd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mthd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A3224_11585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mthd03019
]
A3224_11585
03009 Ribosome biogenesis [BR:
mthd03009
]
A3224_11585
Enzymes [BR:
mthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A3224_11585
Messenger RNA biogenesis [BR:
mthd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A3224_11585
Ribosome biogenesis [BR:
mthd03009
]
Prokaryotic type
rRNA helicases
A3224_11585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Flavi_DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMX03128
UniProt:
A0A143HN45
LinkDB
All DBs
Position
complement(2792835..2794592)
Genome browser
AA seq
585 aa
AA seq
DB search
MTDTPNAPSFDQLGLPTQILSALEKLGYESPSPIQAQTIPSLLEGRDVLGQAQTGTGKTA
AFALPLLAQLDLSERRVQALVLAPTRELAIQVAEACQSYAANLKGFHVAPIYGGADYRGQ
MQQLKRGVQLVVGTPGRVMDHMRRGSLDLSGLKTLVLDEADEMLRMGFIDDVQWVLEQIP
EERQVALFSATMPKEIARIAREHLREPVEVKIRVKTETAETIRQRYWPVGGLHKLDALTR
ILEAEPVDGTIIFVRTKNSTVELADKLTARGFAVAALNGDMAQNLREAVIDKLKKGVLDI
VVATDVAARGLDVARISHVINYDIPYDAEAYIHRIGRTGRAGREGDAILFVAPRERRMLR
IIEKATKKPIERLELPSAAAVNNARMERFRGRITETLEGQTDLAPYRQLVEEYLAHNERD
PLDVAAALAAMVQGDQPLLIKEEERKPRKKRERGDDNFESRKMARRADSKDRFNKGEYEK
DKKMPPPDEGLERFRIEVGREHGVRPGNIVGAIANEVDLDSSYIGRIEIYSEYTTVDLPE
GMPKEVFLHLKQVRVAGRPMKISRLGERSGRSKAKPRGGRRAKRQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacccccaacgctcccagctttgaccagttgggtctgccgacgcaaatactc
agcgcccttgagaagctgggctatgaaagtccctcgccgattcaggctcagaccattcct
tctctgctggaaggccgtgatgtgctggggcaggcgcagaccggcactggcaaaaccgcc
gcttttgcgctgcccttgctggcacagctcgacctcagcgagcgccgcgtacaggcgctg
gtgctggcgccgacccgcgaattggcaatccaggtggcggaggcctgccagtcctacgcc
gccaacttgaagggctttcatgtggcgccgatttacggcggcgccgactaccgtggccag
atgcagcaactgaaacgcggtgtgcagctggtggtgggtactcccgggcgggtgatggac
catatgcgccgcggttccctggatctctccggtttgaagacactggttctggatgaagcc
gatgagatgttgcgcatgggatttatcgacgatgtgcagtgggtgctggagcaaatcccg
gaagagcgccaggtggcgcttttctccgccaccatgccgaaggaaattgcgcgcattgct
cgcgagcacctgcgagagccggtggaagtgaaaatccgcgtaaagacggagaccgccgag
accattcgccagcgctactggccggtgggtggtctgcacaagctggatgcgctgacccgg
attctcgaggcggaaccggtggacggcaccattatcttcgtgcgtaccaaaaacagtacc
gtggagctggccgataagctcactgcacggggctttgccgtcgctgccttgaatggcgat
atggcacagaacctgcgcgaggcggtgatcgacaagctgaaaaaaggtgtactggatatt
gtggtggccaccgatgtggctgcccgcggcctggatgtggcgcgtatcagccatgtaatc
aactacgacatcccctacgatgccgaggcctatatccaccgtattggccgcaccggccgc
gccgggcgcgagggggatgcgattctgttcgtcgccccgcgggagcggcgcatgctgcgc
attatcgaaaaggccaccaagaaaccgatcgagcggttggaactgcccagcgccgcggcg
gtgaataatgcgcgtatggagcgcttccgcggacgcattaccgaaacccttgaagggcag
acagacctcgcaccctaccgccaactggtggaggagtacttggcccacaacgaacgggac
cctttggatgtcgctgcggctcttgccgctatggttcagggtgaccagccgctgttaatc
aaggaagaggaacgcaagccgcgcaagaaaagagagcgtggcgacgacaacttcgagagc
cgcaaaatggcccgaagggcggattccaaagacaggttcaacaagggcgagtacgagaaa
gataagaagatgccgccgcccgatgaagggctggagcgtttccgtatcgaagtgggacgc
gagcacggcgtacgcccgggcaatatcgtcggagccatcgccaacgaagtggatctggac
agctcctatatcggccgaattgagatttactccgagtacaccacggtggacttgccggaa
ggtatgccgaaggaggtgtttctgcacttaaagcaggtgcgggtagccggccgaccgatg
aagatttcccgcctcggggagcggtctggaaggtccaaggcaaagccccgcgggggacgc
agggcaaagcgccagtaa
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