KEGG   Methanosarcina thermophila CHTI-55: MSTHC_0708
Entry
MSTHC_0708        CDS       T03891                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mthe  Methanosarcina thermophila CHTI-55
Pathway
mthe03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSTHC_0708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mthe03032]
    MSTHC_0708
DNA replication proteins [BR:mthe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSTHC_0708
SSDB
Motif
Pfam: AAA RCF1-5-like_lid Rad17 RuvB_N AAA_22 AAA_assoc_2 AAA_6 AAA_14 nSTAND3 IstB_IS21 AAA_16 AAA_30 IPT DNAX_ATPase_lid AAA_5 DUF815 AAA_33 AAA_28 NACHT TsaE AAA_7 RNA_helicase AAA_18 PPV_E1_C UBA_Rad5 PhoH RsgA_GTPase AAA_25
Other DBs
NCBI-ProteinID: AKB15026
UniProt: A0A0E3NE84
LinkDB
Position
complement(885229..887133)
AA seq 634 aa
MTLAIEWAEKYRPQTLKEIVGNKKAVQDLRTWAEKWLSGIPEKRAVILLGPAGVGKTSTA
HALARDMGWEVIELNASDQRTAGVIEKVAGSAASMNTLFGGKRLIILDEADNLHGTADRG
GMRAIAGIIKNTLQPIVLIVNDVYGLTPTIRNLCQEIKFGSVQSRSMIPALKKICESEKI
LCSPDAIQQIAENAGGDLRSAINDLQAAASGREVLEVEDISTSSRDVKENIFKVMQRIFK
STDCKKALEATYGLDESPEDLIHWIDENLPAQYASKDGDLGDIRTGFGYLSRADLYLGRV
KKRQNYGMWRYASMLMVCGAAISKTKPYPGFIKYQSPSLWRKMGQIRSRRDLRDNIASKI
GEHSFESMRYSRDNLLELYSRMLKEEESAVEITAALGLELEELIYLSGSTKASKKLQKIY
DRAQELLLEGKGQSDDVEFWNPSPSIESKEMPSGCAFNTAEEKTGKYSEKSDESDSKTAR
GGQKTLNFGVAISPETSLEITNSRNKNSDANIPYSFTSDTLLPDSLTSDSLNQEKSQEEV
GEIGFISNSFKSDNPKLDNLRSASSLPEFFESETFPAPESIESVTSPELSKPKEPVNCKP
VIKNAPDKPENPEAETSEAPKKTGSKTQKTLFDF
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgacactggcgattgaatgggctgaaaaataccgcccccagaccctgaaggagatcgtg
gggaacaagaaggcggtgcaggatttgcgaacctgggctgagaagtggctttcaggcatt
cccgagaaaagagcagtgatccttctgggacctgcaggggtagggaaaacctctactgcc
catgcccttgcccgcgatatgggttgggaagtaattgagctcaatgcaagcgaccagaga
actgcaggggttatcgagaaagttgcgggatcggcagcttcaatgaataccctctttgga
ggaaaacgcctgataattctggatgaagcggacaaccttcacgggactgctgaccggggt
ggaatgcgggctattgcagggattataaagaatacgctgcagcctatagtgctgattgta
aacgatgtttatggactgactcctactatccggaacctctgtcaggaaataaagtttgga
tcagtacagagccgttctatgattcctgctttgaagaagatctgtgagagcgaaaaaatt
ttatgtagtccggacgcaatccagcaaattgctgaaaatgcaggaggcgacctcagaagt
gcaatcaatgaccttcaggctgcagcaagtggaagggaagtgctggaagtcgaggatatc
agcacttcaagcagggatgtcaaagaaaacatcttcaaggtaatgcagagaatatttaag
agcacagactgtaaaaaagccctggaagctacttacgggcttgatgagagccctgaagac
cttatacactggattgatgaaaacctgcctgcccaatatgcttctaaggacggggatctg
ggagatataagaaccggtttcgggtatctttccagggctgatctttaccttgggcgcgta
aaaaaacgccagaactacggcatgtggagatatgcaagcatgctgatggtctgcggagct
gcaatctcaaagacaaaaccctatcccggatttatcaagtatcaatctccttctctgtgg
agaaagatggggcagatacgatcgagacgagatctaagggacaatatagcttctaaaatt
ggagaacacagcttcgagtccatgcgttattcccgagacaacctgcttgagctttactct
cgcatgttaaaggaagaagaatctgcagttgagattactgcagccctggggcttgagctt
gaggaattaatatatctctcggggagcacaaaagccagcaaaaagctacagaaaatttac
gacagagcgcaggaactccttcttgaaggaaaagggcaatccgatgacgtggagttttgg
aatccttctccttcaatcgagagtaaagagatgccttctggctgtgcatttaataccgct
gaggagaaaaccgggaagtattctgaaaaatctgatgaatccgattcaaaaactgcccgg
ggtggacaaaaaacccttaattttggcgtcgctatttcgccggaaacctccctggaaata
acaaattcgagaaataagaattctgatgccaatattccttatagttttacttcagacaca
cttttacctgacagtttgacttcagattctctaaatcaggagaagtctcaggaagaggtt
ggtgaaatcgggtttatatctaacagttttaagtcagacaaccctaagctagataatctt
cggagtgcttcctccctgcctgagttctttgagagtgaaaccttccctgctcctgaaagt
atagaaagcgttacctctcctgaactctcaaagccgaaggaacctgtgaactgtaagccc
gttatcaaaaacgctcctgacaaacctgaaaatcctgaggcagagaccagtgaagctcct
aagaaaaccgggtcgaaaacgcaaaaaacgcttttcgacttctaa

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